RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 PXMP2Q9NR77 195 aa8.7□□□□□ -1.02
SSBP2-213ENST00000509743 RGL1Q9NZL6 768 aa8.7□□□□□ -1.02
SSBP2-213ENST00000509743 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
SSBP2-213ENST00000509743 CAPN11Q9UMQ6 739 aa8.7□□□□□ -1.02
SSBP2-213ENST00000509743 LUC7L2Q9Y383 392 aaKnown RBP8.7□□□□□ -1.02
SSBP2-213ENST00000509743 SNCAIPQ9Y6H5 919 aa8.7□□□□□ -1.02
SSBP2-213ENST00000509743 UBE4BO95155 1302 aa8.7□□□□□ -1.02
SSBP2-213ENST00000509743 NPHP3-ACAD11A0A0J9YXS1 232 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 ARHGEF35A5YM69 484 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 SPDYE16A6NNV3 312 aaPredicted RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 TRAF5O00463 557 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 PDXKO00764 312 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 DYNC1I1O14576 645 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 EIF3DO15371 548 aaKnown RBP eCLIP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 DHX15O43143 795 aaKnown RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 CALUO43852 315 aaPredicted RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 FAM13AO94988 1023 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 EIF2AK2P19525 551 aaKnown RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 ZNF131P52739 623 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 MRPS9P82933 396 aaKnown RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 PPATQ06203 517 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 GOLGA8FQ08AF8 430 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 GOLGA8DPQ0D2H9 430 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 BAATQ14032 418 aaPredicted RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 LRRC41Q15345 812 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 KNOP1Q1ED39 458 aaKnown RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 CCDC40Q4G0X9 1142 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 MIIPQ5JXC2 388 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 RINT1Q6NUQ1 792 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 EPM2AIP1Q7L775 607 aaPredicted RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 CHST13Q8NET6 341 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 ZNF397Q8NF99 534 aaPredicted RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 OR8K1Q8NGG5 319 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 KIF18AQ8NI77 898 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 CPLX3Q8WVH0 158 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 SCFD1Q8WVM8 642 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 CDHR1Q96JP9 859 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 NDST4Q9H3R1 872 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 ZHX3Q9H4I2 956 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 ABHD10Q9NUJ1 306 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 FBXO40Q9UH90 709 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 DBR1Q9UK59 544 aaKnown RBP8.69□□□□□ -1.02
SSBP2-213ENST00000509743 TRAF3IP3Q9Y228 551 aa8.69□□□□□ -1.02
SSBP2-213ENST00000509743 DOCK1Q14185 1865 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 BAZ2BQ9UIF8 2168 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 WDR64B1ANS9 1081 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 CXCL11O14625 94 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 CETN3O15182 167 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 SLC16A3O15427 465 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 DKC1O60832 514 aaKnown RBP eCLIP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 MYCLP12524 364 aaPredicted RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 TRIM21P19474 475 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 RPL13P26373 211 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 KRT9P35527 623 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 COPB2P35606 906 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ETF1P62495 437 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ZBED6P86452 979 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 CACNB1Q02641 598 aaPredicted RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 RAD51AP2Q09MP3 1159 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ITGB3BPQ13352 177 aaPredicted RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ALCAMQ13740 583 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 TMEM132BQ14DG7 1078 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 SYCP1Q15431 976 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 NFIL3Q16649 462 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 GNPTABQ3T906 1256 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 C1orf186Q6ZWK4 172 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 VSIG10LQ86VR7 867 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ERO1BQ86YB8 467 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 REXO1L1PQ8IX06 675 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 NELFCDQ8IXH7 590 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ANKRD13AQ8IZ07 590 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 GOLGA5Q8TBA6 731 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 PIGOQ8TEQ8 1089 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 INPP4AQ96PE3 977 aaPredicted RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 SENP7Q9BQF6 1050 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 EDEM3Q9BZQ6 932 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 TTYH3Q9C0H2 523 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 MRPL44Q9H9J2 332 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 PARVGQ9HBI0 331 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 TYW1Q9NV66 732 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 ZNHIT6Q9NWK9 470 aaKnown RBP8.68□□□□□ -1.02
SSBP2-213ENST00000509743 TBC1D7Q9P0N9 293 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 FAM184BQ9ULE4 1060 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 RIPK3Q9Y572 518 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 PFASO15067 1338 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 PHLPP2Q6ZVD8 1323 aa8.68□□□□□ -1.02
SSBP2-213ENST00000509743 A0A0G2JLL6 359 aaPredicted RBP8.67□□□□□ -1.02
SSBP2-213ENST00000509743 TTC26A0AVF1 554 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
SSBP2-213ENST00000509743 IQCA1LA6NCM1 817 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 SPDYE5A6NIY4 337 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 SOWAHDA6NJG2 315 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 ADM5C9JUS6 153 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 DDX39AO00148 427 aaKnown RBP8.67□□□□□ -1.02
SSBP2-213ENST00000509743 NFASCO94856 1347 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 GCNT3O95395 438 aa8.67□□□□□ -1.02
SSBP2-213ENST00000509743 NR3C2P08235 984 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms