RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 KIAA0355O15063 1070 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 PRPF3O43395 683 aaKnown RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 RGS20O76081 388 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 MBD3O95983 291 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 NR3C2P08235 984 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 CCNYL3P0C7X3 344 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 TXNP10599 105 aaKnown RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 U2AF2P26368 475 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIO-213ENST00000509354 KIF5BP33176 963 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 MMP16P51512 607 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 ZNF445P59923 1031 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 ARHGAP1Q07960 439 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 ITGA7Q13683 1181 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 LY6KQ17RY6 165 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 MCTP1Q6DN14 999 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 TMTC3Q6ZXV5 915 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 ANKRD33Q7Z3H0 272 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 FAM126BQ8IXS8 530 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 GPT2Q8TD30 523 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 NSUN6Q8TEA1 469 aaKnown RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 GPKOWQ92917 476 aaPredicted RBP eCLIP8.3□□□□□ -1.08
TRIO-213ENST00000509354 RRP36Q96EU6 259 aaKnown RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 CHAMP1Q96JM3 812 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 MPHOSPH6Q99547 160 aaKnown RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 PDCD2LQ9BRP1 358 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 PPP1R12CQ9BZL4 782 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 TRPV6Q9H1D0 765 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 TMEM39AQ9NV64 488 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 RBM28Q9NW13 759 aaKnown RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 ORC3Q9UBD5 711 aaPredicted RBP8.3□□□□□ -1.08
TRIO-213ENST00000509354 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
TRIO-213ENST00000509354 FRMPD4Q14CM0 1322 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 UMODL1Q5DID0 1318 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 DCDC2CA8MYV0 355 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 GCOM1H8Y6P7 765 aaPredicted RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 B4GALT4O60513 344 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 DEXIO95424 95 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 CD4P01730 458 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 POLR2MP0CAP2 368 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 RAG1P15918 1043 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 CYP2C18P33260 490 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 CPT1AP50416 773 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 PURAQ00577 322 aaKnown RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 DNM1Q05193 864 aaKnown RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 TTLL4Q14679 1199 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 PGM5Q15124 567 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 SHHQ15465 462 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 STXBP2Q15833 593 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 PKN1Q16512 942 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 UBE2SQ16763 222 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 RTN1Q16799 776 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 CPLX2Q6PUV4 134 aaKnown RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 USP17L6PQ6QN14 398 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 BRAPQ7Z569 592 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 FAM184AQ8NB25 1140 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 SLC43A3Q8NBI5 491 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 AFG1LQ8WV93 481 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 TOX2Q96NM4 488 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 IWS1Q96ST2 819 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 SCAND2PQ9GZW5 306 aaPredicted RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 SEC63Q9UGP8 760 aaKnown RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 NAP1L2Q9ULW6 460 aaPredicted RBP8.29□□□□□ -1.08
TRIO-213ENST00000509354 Q9Y3F1 56 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 MROH7Q68CQ1 1323 aa8.29□□□□□ -1.08
TRIO-213ENST00000509354 MYH9P35579 1960 aaKnown RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 A6NJR5 290 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 B4DLN1 442 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 NKRFO15226 690 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRIO-213ENST00000509354 ZEB2O60315 1214 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 GH1P01241 217 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 MMP3P08254 477 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 ZNF286BP0CG31 522 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 CCND2P30279 289 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 GNAQP50148 359 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 CHMP4BP1P59074 171 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 UBE2HP62256 183 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 KRT85P78386 507 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 MRPS9P82933 396 aaKnown RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 FPGSQ05932 587 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 NPY5RQ15761 445 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 NBPF20Q3BBV1 942 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 FAM47CQ5HY64 1035 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 WWC2Q6AWC2 1192 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 SYNE3Q6ZMZ3 975 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 Q7L0L9 218 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 HEATR3Q7Z4Q2 680 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 ARMC2Q8NEN0 867 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 LEO1Q8WVC0 666 aaPredicted RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 WASF1Q92558 559 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 MTG1Q9BT17 334 aaPredicted RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 MAF1Q9H063 256 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 BCAS3Q9H6U6 928 aa8.28□□□□□ -1.08
TRIO-213ENST00000509354 TRMT13Q9NUP7 481 aaKnown RBP8.28□□□□□ -1.08
TRIO-213ENST00000509354 RTEL1Q9NZ71 1219 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms