RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	NDOR1	Q9UHB4	597 aa		6.14	□□□□□ -1.43
NFKB1-208	ENST00000509165	FHAD1	B1AJZ9	1412 aa		6.14	□□□□□ -1.43
NFKB1-208	ENST00000509165	PLB1	Q6P1J6	1458 aa		6.14	□□□□□ -1.43
NFKB1-208	ENST00000509165		A0A0G2JLL6	359 aa	Predicted RBP	6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	ACOT7	O00154	380 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	RASGRP1	O95267	797 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	SRGAP2C	P0DJJ0	459 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	FAH	P16930	419 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	KCNA6	P17658	529 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	RPL13	P26373	211 aa	Known RBP	6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	GPR19	Q15760	415 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	PAN2	Q504Q3	1202 aa	Known RBP	6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	ARHGAP36	Q6ZRI8	547 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	BRAP	Q7Z569	592 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	FGD2	Q7Z6J4	655 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	TTLL6	Q8N841	843 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	SH3TC2	Q8TF17	1288 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	CD244	Q9BZW8	370 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	NTM	Q9P121	344 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	SFMBT1	Q9UHJ3	866 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	SRPK3	Q9UPE1	567 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	TEX14	Q8IWB6	1497 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	BCORL1	Q5H9F3	1711 aa		6.13	□□□□□ -1.43
NFKB1-208	ENST00000509165	TCRBV16S1A1N1	A0A5B0	115 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZNF561-AS1	K7EIQ3	104 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	MAN2B1	O00754	1011 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	PLD2	O14939	933 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	SMARCA5	O60264	1052 aa	Predicted RBP	6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	SASH1	O94885	1247 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	PDE6A	P16499	860 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	KCNC1	P48547	511 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	SARS	P49591	514 aa	Known RBP	6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	LACTB	P83111	547 aa	Predicted RBP	6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	MED1	Q15648	1581 aa	Predicted RBP	6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	TTLL7	Q6ZT98	887 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	STRC	Q7RTU9	1775 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	RIMS1	Q86UR5	1692 aa	Known RBP	6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	OSTM1	Q86WC4	334 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	RELT	Q969Z4	430 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	CLUHP3	Q96NS8	147 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	SMURF1	Q9HCE7	757 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	TMEM260	Q9NX78	707 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	NUB1	Q9Y5A7	615 aa		6.12	□□□□□ -1.43
NFKB1-208	ENST00000509165	CCDC66	A2RUB6	948 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	FAM90A27P	A6NNH2	459 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	NOBOX	O60393	691 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZNF28	P17035	718 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	JAM2	P57087	298 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	ABHD17C	Q6PCB6	329 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	TMC5	Q6UXY8	1006 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	DBX2	Q6ZNG2	339 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZNF761	Q86XN6	746 aa	Predicted RBP	6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	DTX3	Q8N9I9	347 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	RNPC3	Q96LT9	517 aa	Known RBP	6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	MAGEB10	Q96LZ2	347 aa	Predicted RBP	6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	CATSPERZ	Q9NTU4	200 aa		6.11	□□□□□ -1.43
NFKB1-208	ENST00000509165	TTBK1	Q5TCY1	1321 aa	Predicted RBP	6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	RAPGEF3	O95398	923 aa		6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	MLLT6	P55198	1093 aa	Predicted RBP	6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	FNDC3B	Q53EP0	1204 aa	Known RBP	6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	CD276	Q5ZPR3	534 aa		6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	PTRH1	Q86Y79	214 aa	Known RBP	6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZC3H7A	Q8IWR0	971 aa	Known RBP	6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	ADAMTS17	Q8TE56	1095 aa		6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZSWIM3	Q96MP5	696 aa		6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	TMEM209	Q96SK2	561 aa		6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	CELF4	Q9BZC1	486 aa	Known RBP	6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	SRCAP	Q6ZRS2	3230 aa		6.1	□□□□□ -1.43
NFKB1-208	ENST00000509165	KIAA0586	Q9BVV6	1533 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	PPP1R12A	O14974	1030 aa	Predicted RBP	6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	GSTA4	O15217	222 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	COL6A1	P12109	1028 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	PTPN1	P18031	435 aa	Known RBP	6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	CRY1	Q16526	586 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	FAM47C	Q5HY64	1035 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	FIGN	Q5HY92	759 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	OVCH1	Q7RTY7	1134 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZDHHC14	Q8IZN3	488 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	NLGN4X	Q8N0W4	816 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	ZCCHC14	Q8WYQ9	949 aa	Known RBP	6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	DLL4	Q9NR61	685 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	RTEL1	Q9NZ71	1219 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	COQ6	Q9Y2Z9	468 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	LTBP4	Q8N2S1	1624 aa		6.09	□□□□□ -1.43
NFKB1-208	ENST00000509165	BIVM-ERCC5	R4GMW8	1640 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	ESYT3	A0FGR9	886 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	DNM2	P50570	870 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	ST5	P78524	1137 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	SEC23A	Q15436	765 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	FAM26F	Q5R3K3	315 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	NT5DC1	Q5TFE4	455 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	BTBD8	Q5XKL5	378 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	VASN	Q6EMK4	673 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	FSTL4	Q6MZW2	842 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	HHIPL2	Q6UWX4	724 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	FRMD5	Q7Z6J6	570 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	CLIC6	Q96NY7	704 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	PTPRG	P23470	1445 aa		6.08	□□□□□ -1.44
NFKB1-208	ENST00000509165	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.07	□□□□□ -1.44

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