RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 GH1P01241 217 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 CD4P01730 458 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 MYL3P08590 195 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 HOXC8P31273 242 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 MAGEA10P43363 369 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 ARHGAP4P98171 946 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 NR5A1Q13285 461 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 TTLL4Q14679 1199 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 QPCTQ16769 361 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 TCTN1Q2MV58 587 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 GNASQ5JWF2 1037 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 ANKRD33Q7Z3H0 272 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 ARRDC4Q8NCT1 418 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 GPR20Q99678 358 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 GDF15Q99988 308 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 C16orf70Q9BSU1 422 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 OSBPL7Q9BZF2 842 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 WNT8AQ9H1J5 351 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 JADE2Q9NQC1 790 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 STARD7Q9NQZ5 370 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 ORC3Q9UBD5 711 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 PCDHA4Q9UN74 947 aa8.24□□□□□ -1.09
TOPBP1-207ENST00000509162 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 ARVCFO00192 962 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 SOX1O00570 391 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 NKRFO15226 690 aaKnown RBP eCLIP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 SLC37A4O43826 429 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 B4GALT4O60513 344 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 CYP3A4P08684 503 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 SSRP1Q08945 709 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 RABEP1Q15276 862 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 TRIM71Q2Q1W2 868 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 REXO1Q8N1G1 1221 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 KCTD17Q8N5Z5 321 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 PPTC7Q8NI37 304 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 GPRASP2Q96D09 838 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 ZBTB10Q96DT7 871 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 MBOAT7Q96N66 472 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 MXRA8Q9BRK3 442 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 HTATIP2Q9BUP3 242 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 TRPV6Q9H1D0 765 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 AGO4Q9HCK5 861 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 TRMT13Q9NUP7 481 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 ELP1O95163 1332 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 WDR81Q562E7 1941 aa8.23□□□□□ -1.09
TOPBP1-207ENST00000509162 COL4A6Q14031 1691 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 A0A0U1RQG5 324 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 SPDYE3A6NKU9 549 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 MEIS1O00470 390 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 KIAA0355O15063 1070 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 LGALS2P05162 132 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 CAPN2P17655 700 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 CIITAP33076 1130 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 SP4Q02446 784 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 ITGA7Q13683 1181 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 GPNMBQ14956 572 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 NBPF20Q3BBV1 942 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 C9orf50Q5SZB4 431 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 GDF6Q6KF10 455 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 METTL7BQ6UX53 244 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 B3GNT9Q6UX72 402 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 BLIDQ8IZY5 108 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 CCDC148Q8NFR7 591 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 ETNPPLQ8TBG4 499 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 DPF3Q92784 378 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 TMX3Q96JJ7 454 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 AP5M1Q9H0R1 490 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 SH3GLB2Q9NR46 395 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 KCNH7Q9NS40 1196 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 LIMCH1Q9UPQ0 1083 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 TRIP12Q14669 1992 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 REV3LO60673 3130 aa8.22□□□□□ -1.09
TOPBP1-207ENST00000509162 TET1Q8NFU7 2136 aa8.21□□□□□ -1.09
TOPBP1-207ENST00000509162 CPLX1O14810 134 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 MSH4O15457 936 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 GPR37L1O60883 481 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 STAM2O75886 525 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 CLTBP09497 229 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 CYP2C9P11712 490 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 NDUFV2P19404 249 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 CPT1AP50416 773 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 MRPL12P52815 198 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 TRAF1Q13077 416 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 MTMR1Q13613 665 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 MBTPS1Q14703 1052 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 UGCGQ16739 394 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 INF2Q27J81 1249 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 KMT5BQ4FZB7 885 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 CEP55Q53EZ4 464 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 KRT40Q6A162 431 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 XRRA1Q6P2D8 792 aa8.21□□□□□ -1.1
TOPBP1-207ENST00000509162 DHX37Q8IY37 1157 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms