RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 HOOK2Q96ED9 719 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 PRMT6Q96LA8 375 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 RIOK1Q9BRS2 568 aaKnown RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 CRNKL1Q9BZJ0 848 aaKnown RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ATXN3LQ9H3M9 355 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 DIAPH3Q9NSV4 1193 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ATP8A2Q9NTI2 1148 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 USP40Q9NVE5 1235 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 MINDY4BA8MYZ0 360 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 GFRA2O00451 464 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 EPB41L2O43491 1005 aaKnown RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 CDC45O75419 566 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 TOMM70O94826 608 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 PF4P02776 101 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 CHMLP26374 656 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 RHBDL3P58872 404 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 RPS26P62854 115 aaKnown RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 FSTL1Q12841 308 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 NBPF9Q3BBW0 867 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 CDC42EP5Q6NZY7 148 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZAR1Q86SH2 424 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 TEX11Q8IYF3 940 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 RNF214Q8ND24 703 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 SMC1BQ8NDV3 1235 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 FAM151AQ8WW52 585 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 OSBP2Q969R2 916 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 RHOVQ96L33 236 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 TBC1D32Q96NH3 1257 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 NACAP1Q9BZK3 213 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 DHX36Q9H2U1 1008 aaKnown RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 TDRD3Q9H7E2 651 aaKnown RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 NMRK2Q9NPI5 230 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 AATFQ9NY61 560 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZNF70Q9UC06 446 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 U3KQE9 123 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 ADAMTSL1Q8N6G6 1762 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 COL2A1P02458 1487 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 FOCADQ5VW36 1801 aa6.53□□□□□ -1.36
HMGB1P44-201ENST00000508597 CDK5RAP2Q96SN8 1893 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 SHTN1A0MZ66 631 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 GPAA1O43292 621 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 LEFTY1O75610 366 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 SSTR4P31391 388 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 NT5C2P49902 561 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 FAM160A1Q05DH4 1040 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 ALX1Q15699 326 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 SUPT20HL1Q3ZLR7 823 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 ANGEL2Q5VTE6 544 aaKnown RBP6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 ADGRA1Q86SQ6 560 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF526Q8TF50 670 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 STRBPQ96SI9 672 aaKnown RBP6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 PUS7LQ9H0K6 701 aaKnown RBP6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 FBRSQ9HAH7 460 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 GGA3Q9NZ52 723 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 PCDHGB7Q9Y5F8 929 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 MYH1P12882 1939 aa6.52□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZMYM6O95789 1325 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 CCDC171Q6TFL3 1326 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 SGSM2O43147 1006 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 ADAMTS4O75173 837 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 WDHD1O75717 1129 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 MBD4O95243 580 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 GARTP22102 1010 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 NF2P35240 595 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 FKBP1BP68106 108 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 NMIQ13287 307 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 MAP7Q14244 749 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 RASA3Q14644 834 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 NKG7Q16617 165 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 SBK1Q52WX2 424 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 WIPI1Q5MNZ9 446 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZBTB37Q5TC79 503 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 CWC27Q6UX04 472 aaKnown RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF765Q7L2R6 523 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 KRT26Q7Z3Y9 468 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 TTC6Q86TZ1 520 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 FOXP4Q8IVH2 680 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 Q8N3U1 123 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 LCORLQ8N3X6 602 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 MIGA1Q8NAN2 632 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 SLC43A3Q8NBI5 491 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 FBXO27Q8NI29 283 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 SH3RF3Q8TEJ3 882 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 TMEM74Q96NL1 305 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 DSCC1Q9BVC3 393 aa6.51□□□□□ -1.37
HMGB1P44-201ENST00000508597 DEFB129Q9H1M3 183 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms