RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KNG1P01042 644 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 GJA4P35212 333 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 SMAD2Q15796 467 aaKnown RBP8□□□□□ -1.13
TOPBP1-206ENST00000508524 CCDC144BQ3MJ40 725 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 ABHD17CQ6PCB6 329 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 HHIPL2Q6UWX4 724 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 NPM2Q86SE8 214 aaKnown RBP8□□□□□ -1.13
TOPBP1-206ENST00000508524 FAM124AQ86V42 546 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 LGI4Q8N135 537 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 IGDCC4Q8TDY8 1250 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 MRFAP1L1Q96HT8 127 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 TMEM168Q9H0V1 697 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 SLC39A2Q9NP94 309 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 ARHGAP20Q9P2F6 1191 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 KLHL18O94889 574 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 CHGBP05060 677 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 KCNA6P17658 529 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 GLRBP48167 497 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 ERICH6BQ5W0A0 696 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 FSTL4Q6MZW2 842 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 PKN3Q6P5Z2 889 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 BORAQ6PGQ7 559 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 STPG3Q8N7X2 389 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 FTSJ1Q9UET6 329 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 INVSQ9Y283 1065 aa7.99□□□□□ -1.13
TOPBP1-206ENST00000508524 PLD2O14939 933 aa7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 CLASP2O75122 1294 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 C4BPAP04003 597 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 SEC23AQ15436 765 aa7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 NOSTRINQ8IVI9 506 aa7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 SH3TC2Q8TF17 1288 aa7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 CLUHP3Q96NS8 147 aa7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 PIF1Q9H611 641 aa7.98□□□□□ -1.13
TOPBP1-206ENST00000508524 FBXO21O94952 628 aa7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 RAPGEF3O95398 923 aa7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 PLP2Q04941 152 aa7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 TBC1D10BQ4KMP7 808 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 TM4SF20Q53R12 229 aa7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 OVCH1Q7RTY7 1134 aa7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 KLHL36Q8N4N3 616 aa7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 RBM15Q96T37 977 aaKnown RBP eCLIP7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 TACO1Q9BSH4 297 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-206ENST00000508524 PLATP00750 562 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 ITGB3P05106 788 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 AOAHP28039 575 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 EFEMP1Q12805 493 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 NFATC3Q12968 1075 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 CPZQ66K79 652 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 EP400NLQ6ZTU2 488 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 BTBD7Q9P203 1132 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 ADAM29Q9UKF5 820 aa7.96□□□□□ -1.14
TOPBP1-206ENST00000508524 PRAMEF25A6NGN4 478 aa7.95□□□□□ -1.14
TOPBP1-206ENST00000508524 FNDC3BQ53EP0 1204 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-206ENST00000508524 IGSF22Q8N9C0 903 aa7.95□□□□□ -1.14
TOPBP1-206ENST00000508524 TMEM260Q9NX78 707 aa7.95□□□□□ -1.14
TOPBP1-206ENST00000508524 ARHGAP28Q9P2N2 729 aa7.95□□□□□ -1.14
TOPBP1-206ENST00000508524 CNOT11Q9UKZ1 510 aaKnown RBP7.95□□□□□ -1.14
TOPBP1-206ENST00000508524 APPP05067 770 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 KRTAP10-2P60368 255 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 HERVK_113P62684 666 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 TMEM177Q53S58 311 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 Q6ZUG5 572 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 KBTBD2Q8IY47 623 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 SSBP3Q9BWW4 388 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 KRTAP9-3Q9BYQ3 159 aa7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 BARX1Q9HBU1 254 aaPredicted RBP7.94□□□□□ -1.14
TOPBP1-206ENST00000508524 K7ESM1 405 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 SCDO00767 359 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 PPP1R12AO14974 1030 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 LAMTOR5O43504 91 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 NPTXRO95502 500 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 PTGS1P23219 599 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 MC4RP32245 332 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 PRRT2Q7Z6L0 340 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 PLEKHH3Q7Z736 793 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 AJUBAQ96IF1 538 aa7.93□□□□□ -1.14
TOPBP1-206ENST00000508524 H0Y858 1186 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 DNAJC8O75937 253 aaPredicted RBP7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 MPIG6BO95866 241 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 MMEP08473 750 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 DLG3Q92796 817 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 KATNBL1Q9H079 304 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 INCENPQ9NQS7 918 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 KCNH7Q9NS40 1196 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 ZDHHC9Q9Y397 364 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 B3GALT1Q9Y5Z6 326 aa7.92□□□□□ -1.14
TOPBP1-206ENST00000508524 SLC12A8A0AV02 714 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 RASSF10A6NK89 507 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 CSF2RBP32927 897 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 MECP2P51608 486 aaKnown RBP7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 NFKB2Q00653 900 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 ZNF460Q14592 562 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 SURF1Q15526 300 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 ZCCHC8Q6NZY4 707 aaKnown RBP7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 OTOP1Q7RTM1 612 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 RNPC3Q96LT9 517 aaKnown RBP7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 AMNQ9BXJ7 453 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 GALNT8Q9NY28 637 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms