RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 DYMQ7RTS9 669 aa18.68■□□□□ 0.58
SQSTM1-211ENST00000506690 FAM133AQ8N9E0 248 aa18.68■□□□□ 0.58
SQSTM1-211ENST00000506690 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-211ENST00000506690 TCP11Q8WWU5 503 aa18.68■□□□□ 0.58
SQSTM1-211ENST00000506690 GOLPH3Q9H4A6 298 aa18.68■□□□□ 0.58
SQSTM1-211ENST00000506690 PNMA2Q9UL42 364 aa18.68■□□□□ 0.58
SQSTM1-211ENST00000506690 COL14A1Q05707 1796 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 ERVV-1B6SEH8 477 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 CYTH3O43739 400 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 ANP32DO95626 131 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 FKBP3Q00688 224 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 ARID5AQ03989 594 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 CHADLQ6NUI6 762 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 GLIS3Q8NEA6 775 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 LARP4BQ92615 738 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 L3MBTL3Q96JM7 780 aaPredicted RBP18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 FAM114A2Q9NRY5 505 aa18.67■□□□□ 0.58
SQSTM1-211ENST00000506690 CAND2O75155 1236 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 ITGA4P13612 1032 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 ALADP13716 330 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 CHN1P15882 459 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 GNAQP50148 359 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 CHRNDQ07001 517 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 PSMD2Q13200 908 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 IFI16Q16666 785 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 KRT25Q7Z3Z0 450 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 THOC1Q96FV9 657 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 PNMA5Q96PV4 448 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 TTI1O43156 1089 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 MMEP08473 750 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 CLTAP09496 248 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 MMP13P45452 471 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 SLMAPQ14BN4 828 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 ASIC2Q16515 512 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 DGKHQ86XP1 1220 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 ZMYND12Q9H0C1 365 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 ADAM7Q9H2U9 754 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 KIAA1551Q9HCM1 1747 aa18.66■□□□□ 0.58
SQSTM1-211ENST00000506690 SKAP2O75563 359 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 IGHMBP2P38935 993 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 POU5F1Q01860 360 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 NONOQ15233 471 aaKnown RBP eCLIP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 LRRC41Q15345 812 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 BZW1Q7L1Q6 419 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 HOOK3Q86VS8 718 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 PIGBQ92521 554 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 GANQ9H2C0 597 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 IL17RBQ9NRM6 502 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 L3MBTL1Q9Y468 752 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 AFF2P51816 1311 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 TRPM8Q7Z2W7 1104 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 NEK8Q86SG6 692 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 TBC1D1Q86TI0 1168 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 PNMA8AQ86V59 439 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 ATP8B4Q8TF62 1192 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 EPB41L4BQ9H329 900 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 TRPC6Q9Y210 931 aa18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 UTP11Q9Y3A2 253 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-211ENST00000506690 NUDT17P0C025 328 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 CYP2D6P10635 497 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 MARSP56192 900 aaKnown RBP18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 PTK2Q05397 1052 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 SLFN11Q7Z7L1 901 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 TRIM59Q8IWR1 403 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 AGAP11Q8TF27 550 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 LMBR1Q8WVP7 490 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 PGM2Q96G03 612 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 CCDC134Q9H6E4 229 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 ZBTB1Q9Y2K1 713 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 STXBP5LQ9Y2K9 1186 aa18.64■□□□□ 0.58
SQSTM1-211ENST00000506690 TOM1O60784 492 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 GYG1P46976 350 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 ENOX2Q16206 610 aaKnown RBP18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 KCTD19Q17RG1 926 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 CDCA2Q69YH5 1023 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 IRF2BP2Q7Z5L9 587 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 LRRC34Q8IZ02 419 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 MYOCDQ8IZQ8 938 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 ARMC2Q8NEN0 867 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 ZNF483Q8TF39 744 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 CEP63Q96MT8 703 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 SPAG5Q96R06 1193 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 FMO2Q99518 471 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 CELF4Q9BZC1 486 aaKnown RBP18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 PANK4Q9NVE7 773 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
SQSTM1-211ENST00000506690 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
SQSTM1-211ENST00000506690 TRAF5O00463 557 aa18.63■□□□□ 0.57
SQSTM1-211ENST00000506690 ZNF571Q7Z3V5 609 aaPredicted RBP18.63■□□□□ 0.57
SQSTM1-211ENST00000506690 DDX12PQ92771 950 aa18.63■□□□□ 0.57
SQSTM1-211ENST00000506690 DPH5Q9H2P9 285 aa18.63■□□□□ 0.57
SQSTM1-211ENST00000506690 NOP53Q9NZM5 478 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms