RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PPP1R16BQ96T49 567 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 CD207Q9UJ71 328 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 RWDD3Q9Y3V2 267 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
SNF8-204ENST00000506104 NRCAMQ92823 1304 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 PLXNA4Q9HCM2 1894 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 SPDYE3A6NKU9 549 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 ENPP3O14638 875 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 MBTPS2O43462 519 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 NCK2O43639 380 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 ATP9AO75110 1047 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 RB1P06400 928 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 ICAM3P32942 547 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 KIF5BP33176 963 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 CA8P35219 290 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 NRIP1P48552 1158 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 MRPS6P82932 125 aaKnown RBP9.47□□□□□ -0.89
SNF8-204ENST00000506104 GHRHRQ02643 423 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
SNF8-204ENST00000506104 MTMR1Q13613 665 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 PCNX4Q63HM2 1172 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 TAF2Q6P1X5 1199 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 HFE2Q6ZVN8 426 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 TRMT1LQ7Z2T5 733 aaKnown RBP9.47□□□□□ -0.89
SNF8-204ENST00000506104 RNF135Q8IUD6 432 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 ZNF654Q8IZM8 581 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 GIMAP8Q8ND71 665 aaPredicted RBP9.47□□□□□ -0.89
SNF8-204ENST00000506104 TRAPPC12Q8WVT3 735 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 POP1Q99575 1024 aaKnown RBP9.47□□□□□ -0.89
SNF8-204ENST00000506104 LMAN2LQ9H0V9 348 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 AZI2Q9H6S1 392 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 PSTPIP2Q9H939 334 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 ERAP1Q9NZ08 941 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 PRKAG3Q9UGI9 489 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 MRPL42Q9Y6G3 142 aaKnown RBP9.47□□□□□ -0.89
SNF8-204ENST00000506104 TTC3P53804 2025 aa9.47□□□□□ -0.89
SNF8-204ENST00000506104 DDX39AO00148 427 aaKnown RBP9.46□□□□□ -0.9
SNF8-204ENST00000506104 TBX10O75333 385 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 PLEKHA8P1O95397 391 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 STAG3L1P0CL83 205 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 SP100P23497 879 aaPredicted RBP9.46□□□□□ -0.9
SNF8-204ENST00000506104 LTBRP36941 435 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 GATMP50440 423 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 NHLH1Q02575 133 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 PAK2Q13177 524 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 TMEM266Q2M3C6 531 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 FAM26DQ5JW98 314 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 FBXO47Q5MNV8 452 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 TTC22Q5TAA0 569 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 IER5Q5VY09 327 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 TSHZ1Q6ZSZ6 1077 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 HEATR3Q7Z4Q2 680 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 ZBTB33Q86T24 672 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 KLHL23Q8NBE8 558 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 PGBD1Q96JS3 809 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 RPGRIP1Q96KN7 1286 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 MFSD14AQ96MC6 490 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 APOL5Q9BWW9 433 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 NAP1L2Q9ULW6 460 aaPredicted RBP9.46□□□□□ -0.9
SNF8-204ENST00000506104 TRPV2Q9Y5S1 764 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 TAF6LQ9Y6J9 622 aa9.46□□□□□ -0.9
SNF8-204ENST00000506104 MYH9P35579 1960 aaKnown RBP9.46□□□□□ -0.9
SNF8-204ENST00000506104 GSTTP1A0A1W2PQM5 241 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 BACH1O14867 736 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 PRC1O43663 620 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 SCG2P13521 617 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 INSRRP14616 1297 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 HOXC8P31273 242 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 ZNF76P36508 570 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 GNAQP50148 359 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 TROAPQ12815 778 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
SNF8-204ENST00000506104 SMAD2Q15796 467 aaKnown RBP9.45□□□□□ -0.9
SNF8-204ENST00000506104 ADGRD2Q7Z7M1 963 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 SUGP1Q8IWZ8 645 aaKnown RBP9.45□□□□□ -0.9
SNF8-204ENST00000506104 PBXIP1Q96AQ6 731 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 GPRASP2Q96D09 838 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 CDHR1Q96JP9 859 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 SENP7Q9BQF6 1050 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 SDF4Q9BRK5 362 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 LRRC2Q9BYS8 371 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 TLE6Q9H808 572 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 AGO3Q9H9G7 860 aaKnown RBP9.45□□□□□ -0.9
SNF8-204ENST00000506104 BARX2Q9UMQ3 279 aaPredicted RBP9.45□□□□□ -0.9
SNF8-204ENST00000506104 PCDHA6Q9UN73 950 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 PLAGL2Q9UPG8 496 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 PCDHGC5Q9Y5F6 944 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 PCDHA8Q9Y5H6 950 aa9.45□□□□□ -0.9
SNF8-204ENST00000506104 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
SNF8-204ENST00000506104 POTEB3A0JP26 581 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 DENND3A2RUS2 1198 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 TBKBP1A7MCY6 615 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 C5orf67F2Z3F1 127 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 MEIS2O14770 477 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 PER2O15055 1255 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 DGKIO75912 1065 aa9.44□□□□□ -0.9
SNF8-204ENST00000506104 DDAH1O94760 285 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms