RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
USP17L28-201ENST00000504543 DDX41Q9UJV9 622 aaKnown RBP11.45□□□□□ -0.58
USP17L28-201ENST00000504543 PHF24Q9UPV7 400 aa11.45□□□□□ -0.58
USP17L28-201ENST00000504543 PCDHA5Q9Y5H7 936 aa11.45□□□□□ -0.58
USP17L28-201ENST00000504543 ESPNB1AK53 854 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 CABYRO75952 493 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 MYL1P05976 194 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 TPM3P06753 285 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 TXNP10599 105 aaKnown RBP11.44□□□□□ -0.58
USP17L28-201ENST00000504543 TPM4P67936 248 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
USP17L28-201ENST00000504543 MORC3Q14149 939 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 UBE2SQ16763 222 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 BRDTQ58F21 947 aaPredicted RBP11.44□□□□□ -0.58
USP17L28-201ENST00000504543 PDXDC2PQ6P474 469 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 IL31RAQ8NI17 732 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 MRFAP1L1Q96HT8 127 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 GSDMAQ96QA5 445 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 AP5M1Q9H0R1 490 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 PDGFCQ9NRA1 345 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
USP17L28-201ENST00000504543 A6NJR5 290 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 KBTBD13C9JR72 458 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MEIS1O00470 390 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 BIN1O00499 593 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 ADCY6O43306 1168 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 ZEB2O60315 1214 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
USP17L28-201ENST00000504543 GH1P01241 217 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MYCLP12524 364 aaPredicted RBP11.43□□□□□ -0.58
USP17L28-201ENST00000504543 HOXD8P13378 290 aaPredicted RBP11.43□□□□□ -0.58
USP17L28-201ENST00000504543 CPT1AP50416 773 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
USP17L28-201ENST00000504543 ZNF75DP51815 510 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 ARHGAP4P98171 946 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 DPYDQ12882 1025 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 LAMC2Q13753 1193 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 NEDD9Q14511 834 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 CEP55Q53EZ4 464 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 TLK2Q86UE8 772 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 IGSF22Q8N9C0 903 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MLKLQ8NB16 471 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 PAGE5Q96GU1 130 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MTMR9Q96QG7 549 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MXRA8Q9BRK3 442 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 JADE2Q9NQC1 790 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 TMEM260Q9NX78 707 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 MAN1B1Q9UKM7 699 aa11.43□□□□□ -0.58
USP17L28-201ENST00000504543 A0A087WWV3 80 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.42□□□□□ -0.58
USP17L28-201ENST00000504543 SLC26A4O43511 780 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
USP17L28-201ENST00000504543 PTMAP06454 111 aaKnown RBP11.42□□□□□ -0.58
USP17L28-201ENST00000504543 KCNA4P22459 653 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 MYL5Q02045 173 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 NCAPHQ15003 741 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 SNX17Q15036 470 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 CALCRLQ16602 461 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 EEPD1Q7L9B9 569 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 MBOAT7Q96N66 472 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 HTATIP2Q9BUP3 242 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 RAB34Q9BZG1 259 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 TRIM5Q9C035 493 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 C11orf49Q9H6J7 331 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 ZKSCAN5Q9Y2L8 839 aa11.42□□□□□ -0.58
USP17L28-201ENST00000504543 CYP3A7-CYP3A51PA0A087WV96 503 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 EDIL3O43854 480 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 ITGB5P18084 799 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 CYP3A7P24462 503 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 UBA7P41226 1012 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 STAT6P42226 847 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 SETQ01105 290 aaPredicted RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 ARHGAP1Q07960 439 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 FSCN1Q16658 493 aaKnown RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 PAWRQ96IZ0 340 aaKnown RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 NFASCO94856 1347 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 DYNC1LI2O43237 492 aaPredicted RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 ARIH2O95376 493 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 PGK1P00558 417 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 BMP6P22004 513 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 ACLYP53396 1101 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 PDIA5Q14554 519 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 GNASQ5JWF2 1037 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
USP17L28-201ENST00000504543 METTL7BQ6UX53 244 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
USP17L28-201ENST00000504543 IGLV3-22A0A075B6J6 115 aa11.4□□□□□ -0.58
USP17L28-201ENST00000504543 SLC37A4O43826 429 aa11.4□□□□□ -0.58
USP17L28-201ENST00000504543 TDP2O95551 362 aa11.4□□□□□ -0.58
USP17L28-201ENST00000504543 UBA1P22314 1058 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms