RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 LRFN3Q9BTN0 628 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 STK31Q9BXU1 1019 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 MRPL9Q9BYD2 267 aaKnown RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 ADAM19Q9H013 955 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 TRIT1Q9H3H1 467 aaKnown RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CYP26B1Q9NR63 512 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 NKIRAS2Q9NYR9 191 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 SEL1LQ9UBV2 794 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 TBC1D29Q9UFV1 150 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 KRT32Q14532 448 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 TIGD6Q17RP2 521 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CDCP2Q5VXM1 449 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CCBE1Q6UXH8 406 aaPredicted RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 FAM43AQ8N2R8 423 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 NGEFQ8N5V2 710 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CCM2LQ9NUG4 571 aaPredicted RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 LRCH1Q9Y2L9 728 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 GOLGA8AA7E2F4 631 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 GOLGA8BA8MQT2 603 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 KRT10P13645 584 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 GRK4P32298 578 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 HADHAP40939 763 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 MCM2P49736 904 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 TNFAIP2Q03169 654 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CYP4F3Q08477 520 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 SMAD4Q13485 552 aaKnown RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 PDCD2Q16342 344 aaPredicted RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 UAP1L1Q3KQV9 507 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 FSTL4Q6MZW2 842 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CEP97Q8IW35 865 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 ZC3H7AQ8IWR0 971 aaKnown RBP5.97□□□□□ -1.45
NIPBL-204ENST00000504430 CEP57L1Q8IYX8 460 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 ATG16L2Q8NAA4 619 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 SIMC1Q8NDZ2 872 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 BVESQ8NE79 360 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 DPF3Q92784 378 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 SLC5A5Q92911 643 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 ARFGAP3Q9NP61 516 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 UBN1Q9NPG3 1134 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 DMRT3Q9NQL9 472 aa5.97□□□□□ -1.45
NIPBL-204ENST00000504430 PTPDC1A2A3K4 754 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 SHOXO15266 292 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 SLC7A4O43246 635 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 ZBED1O96006 694 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 PDE4BQ07343 736 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 INF2Q27J81 1249 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 MMEL1Q495T6 779 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 INTS3Q68E01 1043 aaKnown RBP5.96□□□□□ -1.45
NIPBL-204ENST00000504430 TRIM68Q6AZZ1 485 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 THSD4Q6ZMP0 1018 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 DZIP1LQ8IYY4 767 aaKnown RBP5.96□□□□□ -1.45
NIPBL-204ENST00000504430 PPP1R14CQ8TAE6 165 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 GRPEL1Q9HAV7 217 aa5.96□□□□□ -1.45
NIPBL-204ENST00000504430 POTEMA6NI47 508 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 MSCO60682 206 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 MT-ND3P03897 115 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 DHRS4L1P0CG22 281 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 SLC9A1P19634 815 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 C5AR1P21730 350 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 MAPK4P31152 587 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
NIPBL-204ENST00000504430 SRSF2Q01130 221 aaKnown RBP5.96□□□□□ -1.46
NIPBL-204ENST00000504430 MAP3K12Q12852 859 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 CCINQ13939 588 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 PPA1Q15181 289 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 DPY19L1Q2PZI1 675 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 CFAP58Q5T655 872 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 VSIG1Q86XK7 387 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 SIRT2Q8IXJ6 389 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 PCYOX1LQ8NBM8 494 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 LSM14AQ8ND56 463 aaKnown RBP5.96□□□□□ -1.46
NIPBL-204ENST00000504430 RSAD2Q8WXG1 361 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 SLC30A3Q99726 388 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 KLF16Q9BXK1 252 aaPredicted RBP5.96□□□□□ -1.46
NIPBL-204ENST00000504430 FANCFQ9NPI8 374 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 MAGED2Q9UNF1 606 aaPredicted RBP5.96□□□□□ -1.46
NIPBL-204ENST00000504430 AKT3Q9Y243 479 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
NIPBL-204ENST00000504430 ANKRD18BA2A2Z9 1011 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 GOLGA6L22H0YM25 854 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CPLX1O14810 134 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 TGM5O43548 720 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 CTSBP07858 339 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 KRT9P35527 623 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 C17orf67Q0P5P2 114 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 KIF22Q14807 665 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 NKG7Q16617 165 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 ZNF362Q5T0B9 420 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 C4orf50Q6ZRC1 276 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 Q8NFD4 153 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 SLC30A5Q8TAD4 765 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 BAHD1Q8TBE0 780 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 KCTD5Q9NXV2 234 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 TUBD1Q9UJT1 453 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 BLOC1S6Q9UL45 172 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 ITIH6Q6UXX5 1313 aa5.95□□□□□ -1.46
NIPBL-204ENST00000504430 FOXN3O00409 490 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 MRPS35P82673 323 aaKnown RBP5.95□□□□□ -1.46
NIPBL-204ENST00000504430 HYAL2Q12891 473 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms