RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 FLOT1O75955 427 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 UFL1O94874 794 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
SNF8-203ENST00000504000 AKR1B1P15121 316 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 UCHL3P15374 230 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 INPP5BP32019 993 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 KCNQ4P56696 695 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 PTK2Q05397 1052 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 PDCLQ13371 301 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 UBE2SQ16763 222 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 BMT2Q1RMZ1 405 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 SMIM5Q71RC9 77 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 EPM2AIP1Q7L775 607 aaPredicted RBP16.41■□□□□ 0.22
SNF8-203ENST00000504000 SLFN11Q7Z7L1 901 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 LRRC47Q8N1G4 583 aaKnown RBP16.41■□□□□ 0.22
SNF8-203ENST00000504000 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
SNF8-203ENST00000504000 GPCPD1Q9NPB8 672 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 ARMCX3Q9UH62 379 aaPredicted RBP16.41■□□□□ 0.22
SNF8-203ENST00000504000 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
SNF8-203ENST00000504000 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
SNF8-203ENST00000504000 ANKRD65E5RJM6 399 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 SLC16A3O15427 465 aaKnown RBP16.4■□□□□ 0.22
SNF8-203ENST00000504000 BBOX1O75936 387 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 NR2F2P24468 414 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 MDH1P40925 334 aaKnown RBP16.4■□□□□ 0.22
SNF8-203ENST00000504000 ITGB3BPQ13352 177 aaPredicted RBP16.4■□□□□ 0.22
SNF8-203ENST00000504000 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
SNF8-203ENST00000504000 ARSHQ5FYA8 562 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 RASGEF1CQ8N431 466 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 PACSIN1Q9BY11 444 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 FGFBP2Q9BYJ0 223 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
SNF8-203ENST00000504000 TMBIM4Q9HC24 238 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 HDAC9Q9UKV0 1011 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 MYH7BA7E2Y1 1941 aa16.4■□□□□ 0.22
SNF8-203ENST00000504000 ZSCAN5CA6NGD5 496 aaPredicted RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 MEFVO15553 781 aaPredicted RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 ERCC3P19447 782 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 ECHS1P30084 290 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 USP8P40818 1118 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 AP3B2Q13367 1082 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 BIRC3Q13489 604 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 SPDYCQ5MJ68 293 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 SWT1Q5T5J6 900 aaKnown RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 ZNF571Q7Z3V5 609 aaPredicted RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 NELFCDQ8IXH7 590 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 SYCE1Q8N0S2 351 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 CRYGNQ8WXF5 182 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 SEC14L1Q92503 715 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.39■□□□□ 0.22
SNF8-203ENST00000504000 SLITRK6Q9H5Y7 841 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 SUCLA2Q9P2R7 463 aaPredicted RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 SERPINB13Q9UIV8 391 aa16.39■□□□□ 0.22
SNF8-203ENST00000504000 TTC7AQ9ULT0 858 aaPredicted RBP16.39■□□□□ 0.22
SNF8-203ENST00000504000 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 ESYT3A0FGR9 886 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 GOLGA6L10A6NI86 522 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 PGRMC1O00264 195 aaKnown RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 KCNK3O14649 394 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 CALUO43852 315 aaPredicted RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 FSBPO95073 299 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 SSBP05455 408 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNF8-203ENST00000504000 RFC4P35249 363 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 MTMR3Q13615 1198 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 PTGISQ16647 500 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 EXOC3L4Q17RC7 722 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 ALKBH5Q6P6C2 394 aaKnown RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 RUFY4Q6ZNE9 571 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 SH2D3CQ8N5H7 860 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 ERMNQ8TAM6 284 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 SPAG5Q96R06 1193 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 CEP89Q96ST8 783 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
SNF8-203ENST00000504000 ARFGEF1Q9Y6D6 1849 aa16.39■□□□□ 0.21
SNF8-203ENST00000504000 POTEB3A0JP26 581 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 POTECB2RU33 542 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 H0YGN5 161 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
SNF8-203ENST00000504000 RPL13P26373 211 aaKnown RBP16.38■□□□□ 0.21
SNF8-203ENST00000504000 PON1P27169 355 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 RPA1P27694 616 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 JAM2P57087 298 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 SPIRE1Q08AE8 756 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 GIT2Q14161 759 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 POTEBQ6S5H4 581 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 TPCN2Q8NHX9 752 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 YY1AP1Q9H869 796 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 PLAAQ9Y263 795 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 STXBP5LQ9Y2K9 1186 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 DAAM1Q9Y4D1 1078 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 NFS1Q9Y697 457 aa16.38■□□□□ 0.21
SNF8-203ENST00000504000 BTAF1O14981 1849 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms