RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PRRT2Q7Z6L0 340 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 GMCL1P1Q8NEA9 526 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 TMEM47Q9BQJ4 181 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 EBF2Q9HAK2 575 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 PCDH18Q9HCL0 1135 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 EXOC1Q9NV70 894 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 QPCTLQ9NXS2 382 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 CROTQ9UKG9 612 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 STX8Q9UNK0 236 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 PARP14Q460N5 1801 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 C19orf81C9J6K1 198 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 BOLA2-SMG1P6H3BVE0 249 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 BIN1O00499 593 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 IFIT3O14879 490 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 KIAA0754O94854 1291 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 ATP4AP20648 1035 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 IRAK1P51617 712 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 ZNF157P51786 506 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 SPP2Q13103 211 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 MOGSQ13724 837 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 BLMHQ13867 455 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 TMEM67Q5HYA8 995 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 WHAMMQ8TF30 809 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 CENPHQ9H3R5 247 aa10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 TFIP11Q9UBB9 837 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-207ENST00000503974 NID2Q14112 1375 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 ATP9BO43861 1147 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 ENPP1P22413 925 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 USP14P54578 494 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 ETF1P62495 437 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 MTMR2Q13614 643 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 ARID5BQ14865 1188 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 WTAPQ15007 396 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 DEFB115Q30KQ5 88 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 ACCSLQ4AC99 568 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 CCDC38Q502W7 563 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 IFIT1BQ5T764 474 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 APLFQ8IW19 511 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 TCEANC2Q96MN5 208 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 OSBPL10Q9BXB5 764 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 PCMTD2Q9NV79 361 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 GALNT8Q9NY28 637 aa10.55□□□□□ -0.72
PDLIM5-207ENST00000503974 CCDC69A6NI79 296 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 TRIM75PA6NK02 468 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 SMIM24O75264 130 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 GFPT2O94808 682 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 PRPF6O94906 941 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 TXLNAP40222 546 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 RCAN1P53805 252 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 UBE2HP62256 183 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 CBX3Q13185 183 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 SNAPC2Q13487 334 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 RCN1Q15293 331 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 Q6ZUG5 572 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 NCCRP1Q6ZVX7 275 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 NANOGNBQ7Z5D8 188 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 LCA5Q86VQ0 697 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC7A5P1Q8MH63 180 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 LRRC47Q8N1G4 583 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 NSMCE1Q8WV22 266 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 LPAR1Q92633 364 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 HOOK1Q9UJC3 728 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 RLFQ13129 1914 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 MCM3P25205 808 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 KCNJ6P48051 423 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 GTF2A2P52657 109 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 TROAPQ12815 778 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 MKRN4PQ13434 485 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 KIAA1755Q5JYT7 1200 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 E4F1Q66K89 784 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 CYB5D1Q6P9G0 228 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 LUZP1Q86V48 1076 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 CTNNBL1Q8WYA6 563 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 GMCL1Q96IK5 515 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 MAP3K14Q99558 947 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 SH3GL1Q99961 368 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 SLC39A3Q9BRY0 314 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 PAGR1Q9BTK6 254 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 MAK16Q9BXY0 300 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 KAT14Q9H8E8 782 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 GDPD2Q9HCC8 539 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 LUC7LQ9NQ29 371 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 WDR35Q9P2L0 1181 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 ATXN10Q9UBB4 475 aa10.54□□□□□ -0.72
PDLIM5-207ENST00000503974 PAIP2BQ9ULR5 123 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms