RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 PPP2R3CQ969Q6 453 aa18.22■□□□□ 0.51
DDR1-250ENST00000503628 INPP4AQ96PE3 977 aaPredicted RBP18.22■□□□□ 0.51
DDR1-250ENST00000503628 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
DDR1-250ENST00000503628 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
DDR1-250ENST00000503628 ZFHX2Q9C0A1 2572 aaPredicted RBP18.22■□□□□ 0.51
DDR1-250ENST00000503628 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
DDR1-250ENST00000503628 SGSM2O43147 1006 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 SP4Q02446 784 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 COASYQ13057 564 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 CBX2Q14781 532 aaPredicted RBP18.21■□□□□ 0.51
DDR1-250ENST00000503628 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 RBM23Q86U06 439 aaKnown RBP18.21■□□□□ 0.51
DDR1-250ENST00000503628 PIGSQ96S52 555 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 DSCC1Q9BVC3 393 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 FAM86C1Q9NVL1 165 aa18.21■□□□□ 0.51
DDR1-250ENST00000503628 FIBPO43427 364 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 GFRA3O60609 400 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 STAM2O75886 525 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 NRIP1P48552 1158 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 NAALADL2Q58DX5 795 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 TAF2Q6P1X5 1199 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 KLHL23Q8NBE8 558 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 KRT23Q9C075 422 aa18.2■□□□□ 0.5
DDR1-250ENST00000503628 BARX2Q9UMQ3 279 aaPredicted RBP18.2■□□□□ 0.5
DDR1-250ENST00000503628 USP15Q9Y4E8 981 aaPredicted RBP18.2■□□□□ 0.5
DDR1-250ENST00000503628 CDC45O75419 566 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 GLP2RO95838 553 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 VCPP55072 806 aaKnown RBP18.19■□□□□ 0.5
DDR1-250ENST00000503628 TRAF1Q13077 416 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 SEC23AQ15436 765 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 RSPH3Q86UC2 560 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 RTN4RL1Q86UN2 441 aaPredicted RBP18.19■□□□□ 0.5
DDR1-250ENST00000503628 CMTR2Q8IYT2 770 aaKnown RBP18.19■□□□□ 0.5
DDR1-250ENST00000503628 POF1BQ8WVV4 589 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 DNAJB3Q8WWF6 145 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 LINC01599Q8WXQ3 324 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 AGO3Q9H9G7 860 aaKnown RBP18.19■□□□□ 0.5
DDR1-250ENST00000503628 PCDHGC5Q9Y5F6 944 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 CDY2AQ9Y6F7 541 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
DDR1-250ENST00000503628 SIGLEC14Q08ET2 396 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
DDR1-250ENST00000503628 PAN2Q504Q3 1202 aaKnown RBP18.18■□□□□ 0.5
DDR1-250ENST00000503628 CASC1Q6TDU7 716 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 TSHZ1Q6ZSZ6 1077 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 CRIPAKQ8N1N5 446 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 PHF7Q9BWX1 381 aaPredicted RBP18.18■□□□□ 0.5
DDR1-250ENST00000503628 RIOX1Q9H6W3 641 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
DDR1-250ENST00000503628 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 CYTH3O43739 400 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 AVPR2P30518 371 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 CD52P31358 61 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 TCF7P36402 384 aaPredicted RBP18.17■□□□□ 0.5
DDR1-250ENST00000503628 PPFIA1Q13136 1202 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 GRIK4Q16099 956 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 ASIC4Q96FT7 647 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 SENP7Q9BQF6 1050 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 TUBE1Q9UJT0 475 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 CACNA1HO95180 2353 aa18.17■□□□□ 0.5
DDR1-250ENST00000503628 PNMA6FA0A0J9YX94 578 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 MBLAC1A4D2B0 266 aaPredicted RBP18.16■□□□□ 0.5
DDR1-250ENST00000503628 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 MARK3P27448 753 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 PTH1RQ03431 593 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 MARCH8Q5T0T0 291 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 CYB5R4Q7L1T6 521 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 NPAS4Q8IUM7 802 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 ATOH1Q92858 354 aaPredicted RBP18.16■□□□□ 0.5
DDR1-250ENST00000503628 ZBTB10Q96DT7 871 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 TLE6Q9H808 572 aa18.16■□□□□ 0.5
DDR1-250ENST00000503628 PER2O15055 1255 aa18.15■□□□□ 0.5
DDR1-250ENST00000503628 GATMP50440 423 aa18.15■□□□□ 0.5
DDR1-250ENST00000503628 MRPS6P82932 125 aaKnown RBP18.15■□□□□ 0.5
DDR1-250ENST00000503628 RBM10P98175 930 aaKnown RBP18.15■□□□□ 0.5
DDR1-250ENST00000503628 GRM4Q14833 912 aa18.15■□□□□ 0.5
DDR1-250ENST00000503628 SPTBN4Q9H254 2564 aa18.15■□□□□ 0.5
DDR1-250ENST00000503628 GSTTP1A0A1W2PQM5 241 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 ATP9AO75110 1047 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 STAG3L1P0CL83 205 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 IGBP1P78318 339 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 PCNX4Q63HM2 1172 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 NLRX1Q86UT6 975 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
DDR1-250ENST00000503628 MICAL1Q8TDZ2 1067 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 SEPT1Q8WYJ6 367 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 FAM49AQ9H0Q0 323 aaPredicted RBP18.14■□□□□ 0.49
DDR1-250ENST00000503628 IRF2BPLQ9H1B7 796 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
DDR1-250ENST00000503628 PTPRZ1P23471 2315 aaPredicted RBP18.14■□□□□ 0.49
DDR1-250ENST00000503628 H0Y858 1186 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 ATF7P17544 494 aaPredicted RBP18.13■□□□□ 0.49
DDR1-250ENST00000503628 IER5Q5VY09 327 aa18.13■□□□□ 0.49
DDR1-250ENST00000503628 XRRA1Q6P2D8 792 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms