RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SSBP05455 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 KRT18P05783 430 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 PGK2P07205 417 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 GAP43P17677 238 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 CYP11B2P19099 503 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 YY1P25490 414 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 APLP1P51693 650 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 CYP4A11Q02928 519 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 CCDC173Q0VFZ6 552 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 CTTNQ14247 550 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 DHX8Q14562 1220 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 DEFB115Q30KQ5 88 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 METTL7BQ6UX53 244 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 SEPT14Q6ZU15 432 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 KCNK18Q7Z418 384 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 LUZP1Q86V48 1076 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 SCFD2Q8WU76 684 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 STAMQ92783 540 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 DHTKD1Q96HY7 919 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 FGD4Q96M96 766 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 CCDC43Q96MW1 224 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 UIMC1Q96RL1 719 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 BHMT2Q9H2M3 363 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 ANKEF1Q9NU02 776 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 RGL1Q9NZL6 768 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 PKD2L1Q9P0L9 805 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 SEL1LQ9UBV2 794 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 CPA4Q9UI42 421 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 ODF2LQ9ULJ1 636 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 PPME1Q9Y570 386 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 COL4A3BPQ9Y5P4 624 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 FRMD3A2A2Y4 597 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 NKRFO15226 690 aaKnown RBP eCLIP9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 TBCAO75347 108 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 HOXC6P09630 235 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 SUPT20HL2P0C7V6 817 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 IDEP14735 1019 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 BMP6P22004 513 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 UBA1P22314 1058 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 GUCY2CP25092 1073 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 RGS2P41220 211 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 ACTR2P61160 394 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 PAK1Q13153 545 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 FAM160B1Q5W0V3 765 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 ISM2Q6H9L7 571 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 FOXR2Q6PJQ5 311 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 SARM1Q6SZW1 724 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 STXBP4Q6ZWJ1 553 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 ARMCX2Q7L311 632 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 DHX40Q8IX18 779 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 AOPEPQ8N6M6 819 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 SLC17A8Q8NDX2 589 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 LRRC15Q8TF66 581 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 SEPT1Q8WYJ6 367 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 DNAJC19Q96DA6 116 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 ABHD16BQ9H3Z7 469 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 MLXIPQ9HAP2 919 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 PANK4Q9NVE7 773 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 KCNG1Q9UIX4 513 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 RWDD2AQ9UIY3 292 aa9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 DDX41Q9UJV9 622 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-202ENST00000503338 ZNF236Q9UL36 1845 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 RBM47A0AV96 593 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 BACH1O14867 736 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 COBLO75128 1261 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 FARP2O94887 1054 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 FGFR1OPO95684 399 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CCNE2O96020 404 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CASP1P29466 404 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 YWHABP31946 246 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 MAP2K2P36507 400 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 SLC26A2P50443 739 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 FCGRTP55899 365 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 SPAG1Q07617 926 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 EHHADHQ08426 723 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 COASYQ13057 564 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CRHR2Q13324 411 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 LAMC2Q13753 1193 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 GIT2Q14161 759 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 TPD52L1Q16890 204 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 FAM26FQ5R3K3 315 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CELF3Q5SZQ8 465 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 MORN1Q5T089 497 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 SPATA1Q5VX52 437 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 OLFML2BQ68BL8 750 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 RINT1Q6NUQ1 792 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 ABHD15Q6UXT9 468 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 C1orf186Q6ZWK4 172 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CYFIP1Q7L576 1253 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 DYMQ7RTS9 669 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 EXOC8Q8IYI6 725 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 ADSSL1Q8N142 457 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 GUF1Q8N442 669 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 ZNF784Q8NCA9 323 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 BANK1Q8NDB2 785 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 ANKRD20A12PQ8NF67 263 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms