RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ZNF544Q6NX49 715 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 KRT74Q7RTS7 529 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 STAMQ92783 540 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 FBXL5Q9UKA1 691 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 PLEKHG3A1L390 1219 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 SLC1A4P43007 532 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 SERPINH1P50454 418 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 MKRN3Q13064 507 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 RETREG2Q8NC44 543 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 ECEL1O95672 775 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 MAGEA9P43362 315 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 CCDC103Q8IW40 242 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 TUBGCP2Q9BSJ2 902 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 FANCAO15360 1455 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 ZNF839A8K0R7 811 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 DNAJC6O75061 913 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 ADCY7P51828 1080 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 SRPK1Q96SB4 655 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 PGRMC1O00264 195 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 PABPC4Q13310 644 aaKnown RBP eCLIP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 TSC22D1Q15714 1073 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 USH1GQ495M9 461 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 DIS3LQ8TF46 1054 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 KRCC1Q9NPI7 259 aaPredicted RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 SMARCAL1Q9NZC9 954 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 INTUQ9ULD6 942 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 GRM8O00222 908 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 GRK2P25098 689 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 KLHL12Q53G59 568 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 RHPN1Q8TCX5 695 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 MTERF3Q96E29 417 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 LSM14BQ9BX40 385 aaKnown RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 ADAM30Q9UKF2 790 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 CAPN1P07384 714 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 KIF22Q14807 665 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 UBA2Q9UBT2 640 aaPredicted RBP11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
AC055713.1-201ENST00000498967 PODXLO00592 558 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 CAV1Q03135 178 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 CC2D2BQ6DHV5 1058 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 KIAA1841Q6NSI8 718 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 RNF139Q8WU17 664 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 DIAPH2O60879 1101 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 ZNF174Q15697 407 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 CCNYQ8ND76 341 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 COG1Q8WTW3 980 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 SENP1Q9P0U3 644 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 HPCAL4Q9UM19 191 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 ASXL1Q8IXJ9 1541 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 FOXO3O43524 673 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 HSPA9P38646 679 aaKnown RBP11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 NUDT18Q6ZVK8 323 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 PITPNM3Q9BZ71 974 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 CCDC22O60826 627 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 SUPT3HO75486 399 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 ESRP1Q6NXG1 681 aaKnown RBP11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 PYROXD1Q8WU10 500 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 COL4A3BPQ9Y5P4 624 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 SP100P23497 879 aaPredicted RBP11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 COPS2P61201 443 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 TALDO1P37837 337 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 PIK3CAP42336 1068 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 UBE3AQ05086 875 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 PPP1R13BQ96KQ4 1090 aa11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 XPO6Q96QU8 1125 aaKnown RBP11.97□□□□□ -0.49
AC055713.1-201ENST00000498967 NNMTP40261 264 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 PSMC6P62333 389 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 CAPN12Q6ZSI9 719 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 MAGEB6Q8N7X4 407 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 FAM45AQ8TCE6 357 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 NEK9Q8TD19 979 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 PHACTR3Q96KR7 559 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 TRIM62Q9BVG3 475 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 PSD3Q9NYI0 1048 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 DENND2AQ9ULE3 1009 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 C5orf58C9J3I9 102 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 MTX1Q13505 466 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 ICE2Q659A1 982 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 SRLQ86TD4 932 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 PLIN2Q99541 437 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 SCN3BQ9NY72 215 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 PI4KAP2A4QPH2 592 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 RNF113AO15541 343 aaKnown RBP11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 SDSP20132 328 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 AKAP5P24588 427 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 TBL3Q12788 808 aaKnown RBP11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 TFDP1Q14186 410 aa11.96□□□□□ -0.49
AC055713.1-201ENST00000498967 TMED2Q15363 201 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms