RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 WASH6PQ9NQA3 447 aa8.09□□□□□ -1.11
PDCD4-211ENST00000498367 MOSPD1Q9UJG1 213 aa8.09□□□□□ -1.11
PDCD4-211ENST00000498367 CAB39Q9Y376 341 aaPredicted RBP8.09□□□□□ -1.11
PDCD4-211ENST00000498367 ABCC9O60706 1549 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 A0A087X0M5 115 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 A0A1B0GX30 115 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 CCDC169A6NNP5 214 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 H3BRJ5 948 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 TLR3O15455 904 aaKnown RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 PQBP1O60828 265 aaKnown RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 STARD3NLO95772 234 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 ZBED1O96006 694 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 POU3F2P20265 443 aaPredicted RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 MCM4P33991 863 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 MSH2P43246 934 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 MCM2P49736 904 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 SEPHS1P49903 392 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 NEK4P51957 841 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 NRLP54845 237 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 DRG2P55039 364 aaKnown RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 ABCB5Q2M3G0 1257 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 VWA3BQ502W6 1294 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 CAVIN4Q5BKX8 364 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 SNAP47Q5SQN1 464 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 PRICKLE2Q7Z3G6 844 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 DPP9Q86TI2 863 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 ATCAYQ86WG3 371 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 FAM178BQ8IXR5 827 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 LRRC43Q8N309 656 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 ZNF540Q8NDQ6 660 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 COG1Q8WTW3 980 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 ZNF845Q96IR2 970 aaPredicted RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 SLF1Q9BQI6 1058 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 GPATCH1Q9BRR8 931 aaKnown RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 TXLNGYQ9BZA5 131 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 EPN3Q9H201 632 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 RSAD1Q9HA92 442 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 PDLIM7Q9NR12 457 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 CEP72Q9P209 647 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 IFT80Q9P2H3 777 aaPredicted RBP8.08□□□□□ -1.12
PDCD4-211ENST00000498367 HPCAL4Q9UM19 191 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
PDCD4-211ENST00000498367 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 SLC27A2O14975 620 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 PPP1R12BO60237 982 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 SLITRK5O94991 958 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 YEATS4O95619 227 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 HRGP04196 525 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 RHOQP17081 205 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 ALOX12P18054 663 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 HDCP19113 662 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 MTHFRP42898 656 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 CLCN2P51788 898 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 USP14P54578 494 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 RRP1P56182 461 aaKnown RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 NSUN2Q08J23 767 aaKnown RBP eCLIP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 AP1B1Q10567 949 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 TRDNQ13061 729 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 GRB10Q13322 594 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 C11orf91Q3C1V1 193 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 TTC19Q6DKK2 380 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 RFX8Q6ZV50 586 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 CCDC186Q7Z3E2 898 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 ZER1Q7Z7L7 766 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 GALNT7Q86SF2 657 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 NUP93Q8N1F7 819 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 ZMIZ2Q8NF64 920 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 CTCFLQ8NI51 663 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 HDAC7Q8WUI4 952 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 DHTKD1Q96HY7 919 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 C16orf45Q96MC5 204 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 EYA3Q99504 573 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 DESI2Q9BSY9 194 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 VPS11Q9H270 941 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 CLSTN2Q9H4D0 955 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 MROH8Q9H579 483 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 JMJD4Q9H9V9 463 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 MED4Q9NPJ6 270 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 PLSCR4Q9NRQ2 329 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 FNIP2Q9P278 1114 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 MRFAP1Q9Y605 127 aa8.07□□□□□ -1.12
PDCD4-211ENST00000498367 ZFP37Q9Y6Q3 630 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-211ENST00000498367 A0A1W2PRU2 124 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 PI4K2BG5E9Z4 385 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 EIF3FO00303 357 aaPredicted RBP8.06□□□□□ -1.12
PDCD4-211ENST00000498367 TPP1O14773 563 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 BACH1O14867 736 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 SPTLC2O15270 562 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 SLC7A4O43246 635 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 AHCYL1O43865 530 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 DAB1O75553 588 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 DGKIO75912 1065 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 IGHA1P01876 353 aa8.06□□□□□ -1.12
PDCD4-211ENST00000498367 DHRS4L1P0CG22 281 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms