RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 JPH1Q9HDC5 661 aaPredicted RBP25.79■■□□□ 1.72
CDKN2A-208ENST00000498124 LMCD1Q9NZU5 365 aa25.79■■□□□ 1.72
CDKN2A-208ENST00000498124 V9GY48 417 aaPredicted RBP25.79■■□□□ 1.72
CDKN2A-208ENST00000498124 CPA1P15085 419 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 TAF2Q6P1X5 1199 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 IFIH1Q9BYX4 1025 aaKnown RBP25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 EHMT1Q9H9B1 1298 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 TMEM260Q9NX78 707 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 BARHL2Q9NY43 387 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 TUBE1Q9UJT0 475 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 COG5Q9UP83 839 aa25.78■■□□□ 1.72
CDKN2A-208ENST00000498124 ARP10275 920 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 CLK2P49760 499 aaKnown RBP25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 ADCY7P51828 1080 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 RCAN1P53805 252 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 ITGB3BPQ13352 177 aaPredicted RBP25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 APBB2Q92870 758 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 GLG1Q92896 1179 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 ZBTB10Q96DT7 871 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 SMARCAD1Q9H4L7 1026 aa25.77■■□□□ 1.72
CDKN2A-208ENST00000498124 hCG_1984214I3L0E3 225 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 GHRP10912 638 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 ANAPC15P60006 121 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 LPIN1Q14693 890 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 AAK1Q2M2I8 961 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 BLOC1S2Q6QNY1 142 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 ZNF713Q8N859 430 aaPredicted RBP25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 IL27Q8NEV9 243 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 SLC9A2Q9UBY0 812 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 NFASCO94856 1347 aa25.76■■□□□ 1.71
CDKN2A-208ENST00000498124 NID2Q14112 1375 aa25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 SMCO2A6NFE2 343 aa25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 FOSP01100 380 aaPredicted RBP25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 SREBF1P36956 1147 aa25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 CEP55Q53EZ4 464 aa25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 HLA-CQ95604 372 aa25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 AGO4Q9HCK5 861 aaKnown RBP25.75■■□□□ 1.71
CDKN2A-208ENST00000498124 NLRC5Q86WI3 1866 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 MEIS1O00470 390 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 ADAMTS3O15072 1205 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 ADD1P35611 737 aaKnown RBP25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 ACTR2P61160 394 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 FBXO22Q8NEZ5 403 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 DNAJB3Q8WWF6 145 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 YME1L1Q96TA2 773 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 TM6SF1Q9BZW5 370 aa25.74■■□□□ 1.71
CDKN2A-208ENST00000498124 RALGAPA2Q2PPJ7 1873 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 UPP2O95045 317 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 INSRRP14616 1297 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 IGBP1P78318 339 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 AP3B2Q13367 1082 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 PFKFB3Q16875 520 aaPredicted RBP25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 EPC2Q52LR7 807 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 FBXO47Q5MNV8 452 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 CRYGNQ8WXF5 182 aa25.73■■□□□ 1.71
CDKN2A-208ENST00000498124 APOBRQ0VD83 1088 aa25.72■■□□□ 1.71
CDKN2A-208ENST00000498124 PLCB4Q15147 1175 aa25.72■■□□□ 1.71
CDKN2A-208ENST00000498124 SDF4Q9BRK5 362 aa25.72■■□□□ 1.71
CDKN2A-208ENST00000498124 UPF2Q9HAU5 1272 aaKnown RBP25.72■■□□□ 1.71
CDKN2A-208ENST00000498124 RC3H2Q9HBD1 1191 aaKnown RBP25.72■■□□□ 1.71
CDKN2A-208ENST00000498124 CDY2AQ9Y6F7 541 aa25.72■■□□□ 1.71
CDKN2A-208ENST00000498124 ATG7O95352 703 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 CCNE2O96020 404 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 LINC00271P0C7V0 271 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 RPS6KB1P23443 525 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 METAP2P50579 478 aaKnown RBP eCLIP25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 Q6ZUG5 572 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 RSPH3Q86UC2 560 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 TRAPPC12Q8WVT3 735 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 LINC01599Q8WXQ3 324 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 ZSWIM6Q9HCJ5 1215 aa25.71■■□□□ 1.71
CDKN2A-208ENST00000498124 IGKV6D-21A0A0A0MT36 114 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 FAM86B1E9PN63 330 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 FAM86B2P0C5J1 330 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 SCG2P13521 617 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 MRPS6P82932 125 aaKnown RBP25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 FGD1P98174 961 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 PKN1Q16512 942 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 NIPA1Q7RTP0 329 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 PLPPR4Q7Z2D5 763 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 BRF1Q92994 677 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 SAMD11Q96NU1 681 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 FAM49AQ9H0Q0 323 aaPredicted RBP25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 GLT8D2Q9H1C3 349 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 AZI2Q9H6S1 392 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 AGO3Q9H9G7 860 aaKnown RBP25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 TRPC6Q9Y210 931 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 CYP46A1Q9Y6A2 500 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 ATG2AQ2TAZ0 1938 aa25.7■■□□□ 1.7
CDKN2A-208ENST00000498124 IGLV3-22A0A075B6J6 115 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 ESYT2A0FGR8 921 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 RRN3P2A6NIE6 340 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 JAKMIP3Q5VZ66 844 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 TSHZ1Q6ZSZ6 1077 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 RUFY3Q7L099 469 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 FBXL16Q8N461 479 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 IL17RAQ96F46 866 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 AGXT2Q9BYV1 514 aa25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 NAP1L2Q9ULW6 460 aaPredicted RBP25.69■■□□□ 1.7
CDKN2A-208ENST00000498124 TTC3P53804 2025 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms