RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 MRM1Q6IN84 353 aaKnown RBP4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 ADAMTSL4Q6UY14 1074 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 KIAA1211Q6ZU35 1233 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 EEPD1Q7L9B9 569 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 KRT26Q7Z3Y9 468 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 VN1R5Q7Z5H4 357 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 AMIGO3Q86WK7 504 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 ANKRD18AQ8IVF6 992 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 SYNE4Q8N205 404 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 KBTBD3Q8NAB2 608 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZSWIM2Q8NEG5 633 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZNF669Q96BR6 464 aaPredicted RBP4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 C8orf48Q96LL4 319 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 RPS6KC1Q96S38 1066 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 MPHOSPH8Q99549 860 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 KIF2CQ99661 725 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 YIPF2Q9BWQ6 316 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 ANKRD2Q9GZV1 360 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 PAG1Q9NWQ8 432 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 TFCP2L1Q9NZI6 479 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 GABBR1Q9UBS5 961 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 SRP68Q9UHB9 627 aaKnown RBP4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 SOX13Q9UN79 622 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 PLAAQ9Y263 795 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 MAST2Q6P0Q8 1798 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZNF804BA4D1E1 1349 aa4.39□□□□□ -1.71
RTN4IP1-203ENST00000498091 LAMA4Q16363 1823 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 MEIS3P2A8K0S8 358 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 CAND2O75155 1236 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 KRT18P05783 430 aaKnown RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 GSTP1P09211 210 aaKnown RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 IFIT1P09914 478 aaKnown RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 FAM153BP0C7A2 387 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 ESRRAP11474 423 aaPredicted RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 HSPA4P34932 840 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 CDK8P49336 464 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 MCM2P49736 904 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 ST5P78524 1137 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 UBE4AQ14139 1066 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZFYVE27Q5T4F4 411 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 WDR78Q5VTH9 848 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 HGSNATQ68CP4 663 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 SCARA3Q6AZY7 606 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 PRR5LQ6MZQ0 368 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZSCAN25Q6NSZ9 544 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 VHLLQ6RSH7 139 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 DDX46Q7L014 1031 aaKnown RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 JAMLQ86YT9 394 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 C12orf50Q8NA57 414 aaPredicted RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 UBASH3BQ8TF42 649 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 TMEM40Q8WWA1 233 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 NEUROD6Q96NK8 337 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 IER2Q9BTL4 223 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 SPATA9Q9BWV2 254 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 PUS3Q9BZE2 481 aaKnown RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 TM6SF1Q9BZW5 370 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 CCDC8Q9H0W5 538 aaPredicted RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 HELLSQ9NRZ9 838 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 KCNK4Q9NYG8 393 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 HMG20BQ9P0W2 317 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 PCDHA4Q9UN74 947 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 SLC12A7Q9Y666 1083 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 ANKRD31Q8N7Z5 1873 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 CCDC171Q6TFL3 1326 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 MYH13Q9UKX3 1938 aa4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
RTN4IP1-203ENST00000498091 DLEC1Q9Y238 1755 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 FAM95CA0A1B0GW59 222 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 UPK3BL1B0FP48 263 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 UPK3BL2E5RIL1 263 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 DDX3YO15523 660 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 RNF113AO15541 343 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 BBOX1O75936 387 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 HTR3BO95264 441 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 MYCLP1P12525 358 aaPredicted RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZKSCAN1P17029 563 aaPredicted RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 PREPP48147 710 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 NLRP12P59046 1061 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 TIMM10P62072 90 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 RPS8P62241 208 aaKnown RBP4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 CHRNDQ07001 517 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 DDR1Q08345 913 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 AP3B2Q13367 1082 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 GRAPQ13588 217 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 IKBKEQ14164 716 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 NCAPHQ15003 741 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 PLCL1Q15111 1095 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 PPP2R5AQ15172 486 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 UBE3CQ15386 1083 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 ZNF827Q17R98 1081 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 C4orf46Q504U0 113 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 TMEM67Q5HYA8 995 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 TTC39AQ5SRH9 613 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
RTN4IP1-203ENST00000498091 CWC27Q6UX04 472 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms