RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 CDK5RAP3Q96JB5 506 aa27.16■■□□□ 1.94
TNFRSF4-203ENST00000497869 USP25Q9UHP3 1055 aa27.16■■□□□ 1.94
TNFRSF4-203ENST00000497869 KDM3AQ9Y4C1 1321 aa27.16■■□□□ 1.94
TNFRSF4-203ENST00000497869 SLC26A4O43511 780 aa27.15■■□□□ 1.94
TNFRSF4-203ENST00000497869 ELNP15502 786 aa27.15■■□□□ 1.94
TNFRSF4-203ENST00000497869 SMAP1Q8IYB5 467 aaPredicted RBP27.15■■□□□ 1.94
TNFRSF4-203ENST00000497869 CEP57L1Q8IYX8 460 aa27.15■■□□□ 1.94
TNFRSF4-203ENST00000497869 ZNF862O60290 1169 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 P4HBP07237 508 aaKnown RBP27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 SUPT20HL2P0C7V6 817 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 POSTNQ15063 836 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 SWSAP1Q6NVH7 229 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 GIMAP8Q8ND71 665 aaPredicted RBP27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 RDM1Q8NG50 284 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 PIGOQ8TEQ8 1089 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 ERO1AQ96HE7 468 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 GPR20Q99678 358 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 PYM1Q9BRP8 204 aaKnown RBP27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 NT5C3AQ9H0P0 336 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 BLZF1Q9H2G9 400 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 MLXIPQ9HAP2 919 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 STK17AQ9UEE5 414 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 STK24Q9Y6E0 443 aa27.14■■□□□ 1.94
TNFRSF4-203ENST00000497869 IGKV6D-21A0A0A0MT36 114 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 STBD1O95210 358 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 IRF5Q13568 498 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 CUL4BQ13620 913 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 DHX8Q14562 1220 aaKnown RBP27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 DUSP28Q4G0W2 176 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 DHX37Q8IY37 1157 aaKnown RBP27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 LARP4BQ92615 738 aaKnown RBP27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 GABBR1Q9UBS5 961 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 TMEM150BA6NC51 233 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 QARSP47897 775 aaKnown RBP27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 IQSEC1Q6DN90 963 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 FUCA2Q9BTY2 467 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 GNEQ9Y223 722 aaKnown RBP27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 PCDHA5Q9Y5H7 936 aa27.13■■□□□ 1.93
TNFRSF4-203ENST00000497869 CTAGE5O15320 804 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 ATP4AP20648 1035 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 SLC12A3P55017 1021 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 IRX5P78411 483 aaPredicted RBP27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 DPYDQ12882 1025 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 NEK9Q8TD19 979 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 SPATA33Q96N06 139 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 CUEDC2Q9H467 287 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 KIAA1468Q9P260 1216 aa27.12■■□□□ 1.93
TNFRSF4-203ENST00000497869 MYMKA6NI61 221 aa27.11■■□□□ 1.93
TNFRSF4-203ENST00000497869 PLA2G4BP0C869 781 aa27.11■■□□□ 1.93
TNFRSF4-203ENST00000497869 CYBAP13498 195 aa27.11■■□□□ 1.93
TNFRSF4-203ENST00000497869 ZSWIM4Q9H7M6 989 aa27.11■■□□□ 1.93
TNFRSF4-203ENST00000497869 LYPLA2O95372 231 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 PSAPP07602 524 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 SARSP49591 514 aaKnown RBP27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 PSMC5P62195 406 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 TNFAIP2Q03169 654 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 KANK3Q6NY19 840 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 MIS18BP1Q6P0N0 1132 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 SPATA20Q8TB22 786 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 BEGAINQ9BUH8 593 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 TCEAL9Q9UHQ7 104 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 TUBE1Q9UJT0 475 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 IGSF9BQ9UPX0 1349 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 GH1P01241 217 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 TCF7P36402 384 aaPredicted RBP27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 ZNF445P59923 1031 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 CACNB2Q08289 660 aaPredicted RBP27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 AFG1LQ8WV93 481 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 SEPT1Q8WYJ6 367 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 EMID1Q96A84 441 aaPredicted RBP27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 SH2D3AQ9BRG2 576 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 BHMT2Q9H2M3 363 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 DNM3Q9UQ16 869 aa27.1■■□□□ 1.93
TNFRSF4-203ENST00000497869 MUTP22033 750 aa27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 HOXD10P28358 340 aa27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 ARSHQ5FYA8 562 aa27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 TRMT1LQ7Z2T5 733 aaKnown RBP27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 TRIM50Q86XT4 487 aa27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 C4orf19Q8IY42 314 aa27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 TRIM9Q9C026 710 aa27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 MAFBQ9Y5Q3 323 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF4-203ENST00000497869 GTPBP6O43824 516 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 ADCY3O60266 1144 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 EYA4O95677 639 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 LAMC2Q13753 1193 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 MFSD14CQ5VZR4 134 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 SV2BQ7L1I2 683 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 SYT2Q8N9I0 419 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 NACC1Q96RE7 527 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 MAGEF1Q9HAY2 307 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 BRCA2P51587 3418 aa27.08■■□□□ 1.93
TNFRSF4-203ENST00000497869 NPHP3-ACAD11A0A0J9YXS1 232 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 GNRH1P01148 92 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 CYP11B2P19099 503 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 BMP6P22004 513 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 NT5DC1Q5TFE4 455 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 ANO5Q75V66 913 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 GAS2L3Q86XJ1 694 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 C7orf25Q9BPX7 421 aa27.07■■□□□ 1.92
TNFRSF4-203ENST00000497869 BIN1O00499 593 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms