RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 DDX56Q9NY93 547 aaKnown RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 HCFC2Q9Y5Z7 792 aa9.64□□□□□ -0.87
GARNL3-221ENST00000497703 LRRC10BA6NIK2 292 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 FOXP2O15409 715 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 PEX10O60683 326 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 FAHP16930 419 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 SLC9A1P19634 815 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 SESN3P58005 492 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 NME9Q86XW9 330 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 MIB1Q86YT6 1006 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 DLG3Q92796 817 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 SLC5A5Q92911 643 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 E2F7Q96AV8 911 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 RNF38Q9H0F5 515 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
GARNL3-221ENST00000497703 H2AFY2Q9P0M6 372 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-221ENST00000497703 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 TELO2Q9Y4R8 837 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 RIMBP3CA6NJZ7 1639 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 RIMBP3BA6NNM3 1639 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 RIMBP3Q9UFD9 1639 aa9.63□□□□□ -0.87
GARNL3-221ENST00000497703 FAM90A27PA6NNH2 459 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 LSP1P33241 339 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 ID4P47928 161 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 EVA1CP58658 441 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 HERVK_113P62684 666 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 ELF4Q99607 663 aaPredicted RBP9.62□□□□□ -0.87
GARNL3-221ENST00000497703 BCAS3Q9H6U6 928 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 ARHGAP28Q9P2N2 729 aa9.62□□□□□ -0.87
GARNL3-221ENST00000497703 YBX3P16989 372 aaKnown RBP eCLIP9.61□□□□□ -0.87
GARNL3-221ENST00000497703 CD40P25942 277 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 FNTBP49356 437 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 EXOSC10Q01780 885 aaKnown RBP9.61□□□□□ -0.87
GARNL3-221ENST00000497703 MLANAQ16655 118 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 CD300LDQ6UXZ3 194 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 HIPK4Q8NE63 616 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 PCDH18Q9HCL0 1135 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 PHLDB1Q86UU1 1377 aa9.61□□□□□ -0.87
GARNL3-221ENST00000497703 ATAD2BQ9ULI0 1458 aa9.6□□□□□ -0.87
GARNL3-221ENST00000497703 C4BPAP04003 597 aaKnown RBP9.6□□□□□ -0.87
GARNL3-221ENST00000497703 PDGFRBP09619 1106 aa9.6□□□□□ -0.87
GARNL3-221ENST00000497703 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-221ENST00000497703 SDHAP31040 664 aa9.6□□□□□ -0.87
GARNL3-221ENST00000497703 CPA5Q8WXQ8 436 aa9.6□□□□□ -0.87
GARNL3-221ENST00000497703 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-221ENST00000497703 SEMA7AO75326 666 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 ASGR2P07307 311 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 STAT5AP42229 794 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 PHC1P78364 1004 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 CACNB2Q08289 660 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-221ENST00000497703 ADCY1Q08828 1119 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 ITKQ08881 620 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 GPR158Q5T848 1215 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 BROXQ5VW32 411 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 CREB3L3Q68CJ9 461 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 VASNQ6EMK4 673 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 FSTL4Q6MZW2 842 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 TEPPQ6URK8 271 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 PRR23BQ6ZRT6 265 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 LHFPL2Q6ZUX7 228 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 MTMR8Q96EF0 704 aa9.59□□□□□ -0.87
GARNL3-221ENST00000497703 NOC2LQ9Y3T9 749 aaKnown RBP9.59□□□□□ -0.87
GARNL3-221ENST00000497703 TEX51A0A1B0GUA7 166 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 CYP2C8P10632 490 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 FBXO15Q8NCQ5 510 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-221ENST00000497703 WDR48Q8TAF3 677 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 ERCC4Q92889 916 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-221ENST00000497703 GBP4Q96PP9 640 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 HSPBP1Q9NZL4 362 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 KCNG1Q9UIX4 513 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 ASB1Q9Y576 335 aa9.58□□□□□ -0.88
GARNL3-221ENST00000497703 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 ARHGEF11O15085 1522 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 ACOT7O00154 380 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 DVL2O14641 736 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 S100BP04271 92 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-221ENST00000497703 ENO2P09104 434 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-221ENST00000497703 SMAD3P84022 425 aaKnown RBP9.57□□□□□ -0.88
GARNL3-221ENST00000497703 DBPQ10586 325 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-221ENST00000497703 LRRC32Q14392 662 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 EPHA7Q15375 998 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 SEC23AQ15436 765 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 TERF2Q15554 542 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 SMAD2Q15796 467 aaKnown RBP9.57□□□□□ -0.88
GARNL3-221ENST00000497703 LDHDQ86WU2 507 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 ZNF610Q8N9Z0 462 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 METTL14Q9HCE5 456 aaKnown RBP9.57□□□□□ -0.88
GARNL3-221ENST00000497703 MRC2Q9UBG0 1479 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
GARNL3-221ENST00000497703 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-221ENST00000497703 TGM5O43548 720 aa9.56□□□□□ -0.88
GARNL3-221ENST00000497703 LRG1P02750 347 aa9.56□□□□□ -0.88
GARNL3-221ENST00000497703 MMEP08473 750 aa9.56□□□□□ -0.88
GARNL3-221ENST00000497703 PTX3P26022 381 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-221ENST00000497703 BRDTQ58F21 947 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-221ENST00000497703 CATSPEREQ5SY80 951 aa9.56□□□□□ -0.88
GARNL3-221ENST00000497703 CD276Q5ZPR3 534 aa9.56□□□□□ -0.88
GARNL3-221ENST00000497703 TIGD7Q6NT04 549 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-221ENST00000497703 FRMD7Q6ZUT3 714 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms