RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 DEF6Q9H4E7 631 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 TESMINQ9Y4I5 508 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 TRBV23-1A0A0A0MS06 115 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 FAM90A27PA6NNH2 459 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 ARVCFO00192 962 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 PTPN1P18031 435 aaKnown RBP5.52□□□□□ -1.53
CBX3-208ENST00000497498 SUMO1P63165 101 aaKnown RBP5.52□□□□□ -1.53
CBX3-208ENST00000497498 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 BTBD8Q5XKL5 378 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 CRIP3Q6Q6R5 217 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 GPR155Q7Z3F1 870 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 CDC6Q99741 560 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 SLC39A2Q9NP94 309 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 TCAF1Q9Y4C2 921 aa5.52□□□□□ -1.53
CBX3-208ENST00000497498 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.51□□□□□ -1.53
CBX3-208ENST00000497498 MAN2B1O00754 1011 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 U2SURPO15042 1029 aaKnown RBP5.51□□□□□ -1.53
CBX3-208ENST00000497498 CUTAO60888 179 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 AMY2AP04746 511 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 C6P13671 934 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 AMY2BP19961 511 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 TACR2P21452 398 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 POLD1P28340 1107 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 ZC3H6P61129 1189 aaKnown RBP5.51□□□□□ -1.53
CBX3-208ENST00000497498 SSRP1Q08945 709 aaKnown RBP5.51□□□□□ -1.53
CBX3-208ENST00000497498 USP10Q14694 798 aaKnown RBP5.51□□□□□ -1.53
CBX3-208ENST00000497498 MTERF2Q49AM1 385 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 FAM209AQ5JX71 171 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 TCTN3Q6NUS6 607 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 MTDHQ86UE4 582 aaKnown RBP5.51□□□□□ -1.53
CBX3-208ENST00000497498 IFNL2Q8IZJ0 200 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 Q8N1X5 172 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 FBXW5Q969U6 566 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 GNRHR2Q96P88 292 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 LMF1Q96S06 567 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 CARD11Q9BXL7 1154 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 PCDHA8Q9Y5H6 950 aa5.51□□□□□ -1.53
CBX3-208ENST00000497498 FOXS1O43638 330 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 FSHBP01225 129 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 ZNF888P0CJ79 500 aaPredicted RBP5.5□□□□□ -1.53
CBX3-208ENST00000497498 PDE6AP16499 860 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 NAT1P18440 290 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 GJA4P35212 333 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 TOP3AQ13472 1001 aaPredicted RBP5.5□□□□□ -1.53
CBX3-208ENST00000497498 LONRF2Q1L5Z9 754 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 NAALADL2Q58DX5 795 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 FIGNQ5HY92 759 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 DPP8Q6V1X1 898 aaPredicted RBP5.5□□□□□ -1.53
CBX3-208ENST00000497498 OSTM1Q86WC4 334 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 ZNF747Q9BV97 191 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 CATSPERZQ9NTU4 200 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 RIC8BQ9NVN3 520 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 SRRDQ9UH36 339 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 PFDN2Q9UHV9 154 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 CBLCQ9ULV8 474 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 PTPN22Q9Y2R2 807 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 ATP23Q9Y6H3 246 aa5.5□□□□□ -1.53
CBX3-208ENST00000497498 ESYT3A0FGR9 886 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 ZNF561-AS1K7EIQ3 104 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 MUSKO15146 869 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 DIAPH1O60610 1272 aaKnown RBP5.49□□□□□ -1.53
CBX3-208ENST00000497498 PYGMP11217 842 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 ACVRL1P37023 503 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 GABREP78334 506 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 GUCY1A3Q02108 690 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 PTRH1Q86Y79 214 aaKnown RBP5.49□□□□□ -1.53
CBX3-208ENST00000497498 PALM2Q8IXS6 379 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 NEIL1Q96FI4 390 aaPredicted RBP5.49□□□□□ -1.53
CBX3-208ENST00000497498 EXOC2Q96KP1 924 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 IPO9Q96P70 1041 aaKnown RBP5.49□□□□□ -1.53
CBX3-208ENST00000497498 SORCS2Q96PQ0 1159 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 LRRC37BQ96QE4 947 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 SIRPGQ9P1W8 387 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 ARHGAP28Q9P2N2 729 aa5.49□□□□□ -1.53
CBX3-208ENST00000497498 GSTA4O15217 222 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 FAM153BP0C7A2 387 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 JAM2P57087 298 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 HERVK_113P62684 666 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 LACTBP83111 547 aaPredicted RBP5.48□□□□□ -1.53
CBX3-208ENST00000497498 HS1BP3Q53T59 392 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 SPDYAQ5MJ70 313 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 CXXC5Q7LFL8 322 aaKnown RBP5.48□□□□□ -1.53
CBX3-208ENST00000497498 TAX1BP1Q86VP1 789 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 DHRS4Q9BTZ2 278 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 SCAND2PQ9GZW5 306 aaPredicted RBP5.48□□□□□ -1.53
CBX3-208ENST00000497498 SMURF1Q9HCE7 757 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 BTBD7Q9P203 1132 aa5.48□□□□□ -1.53
CBX3-208ENST00000497498 ZFR2Q9UPR6 939 aaKnown RBP5.48□□□□□ -1.53
CBX3-208ENST00000497498 E9PSI1 815 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 CLASP2O75122 1294 aaKnown RBP5.47□□□□□ -1.53
CBX3-208ENST00000497498 CRTAMO95727 393 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 AMHP03971 560 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 C4BPAP04003 597 aaKnown RBP5.47□□□□□ -1.53
CBX3-208ENST00000497498 ATP2B1P20020 1258 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 PTGS1P23219 599 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 AOAHP28039 575 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 GDF5P43026 501 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 ETV4P43268 484 aa5.47□□□□□ -1.53
CBX3-208ENST00000497498 RAC3P60763 192 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms