RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 CTSHP09668 335 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 PDHBP11177 359 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 LAMC2Q13753 1193 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 FRMD5Q7Z6J6 570 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 RBM23Q86U06 439 aaKnown RBP11.38□□□□□ -0.59
SRSF4-205ENST00000497015 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
SRSF4-205ENST00000497015 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 KATNAL1Q9BW62 490 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 KRT23Q9C075 422 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 IRF2BPLQ9H1B7 796 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 TELO2Q9Y4R8 837 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 MYH6P13533 1939 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 EPB41L2O43491 1005 aaKnown RBP11.37□□□□□ -0.59
SRSF4-205ENST00000497015 SNHG28P0DPA3 235 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 NRIP1P48552 1158 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 HAND2P61296 217 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 ADAM17P78536 824 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 ZNF543Q08ER8 600 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 STXBP2Q15833 593 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 PTPN21Q16825 1174 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 USH1GQ495M9 461 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 RTN4RL1Q86UN2 441 aaPredicted RBP11.37□□□□□ -0.59
SRSF4-205ENST00000497015 IQCA1Q86XH1 822 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 DGKHQ86XP1 1220 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 ADSSL1Q8N142 457 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
SRSF4-205ENST00000497015 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.592e-6■■■□□ 14.6
SRSF4-205ENST00000497015 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 S1PR5Q9H228 398 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 SMOC2Q9H3U7 446 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 RALGAPA2Q2PPJ7 1873 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 DMXL1Q9Y485 3027 aa11.37□□□□□ -0.59
SRSF4-205ENST00000497015 ADGRA3Q8IWK6 1321 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 DNAH14Q0VDD8 3507 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 C17orf102A2RUQ5 167 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 PER2O15055 1255 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 EIF3JO75822 258 aaKnown RBP11.36□□□□□ -0.59
SRSF4-205ENST00000497015 DGKIO75912 1065 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 NR3C2P08235 984 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 GOLGA8HP0CJ92 632 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 SMIM10L2AP0DMW4 78 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 SMIM10L2BP0DMW5 78 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 TRDNQ13061 729 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 CELF3Q5SZQ8 465 aaKnown RBP11.36□□□□□ -0.59
SRSF4-205ENST00000497015 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 IWS1Q96ST2 819 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 RMDN3Q96TC7 470 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 MPHOSPH6Q99547 160 aaKnown RBP11.36□□□□□ -0.59
SRSF4-205ENST00000497015 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 EHMT1Q9H9B1 1298 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 TOMM22Q9NS69 142 aa11.36□□□□□ -0.59
SRSF4-205ENST00000497015 MRPL42Q9Y6G3 142 aaKnown RBP11.36□□□□□ -0.59
SRSF4-205ENST00000497015 B4DLN1 442 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 OPLAHO14841 1288 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 EIF5BO60841 1220 aaKnown RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 KDM4AO75164 1064 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 CYP21A2P08686 494 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 TOP1P11387 765 aaKnown RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 ATF7P17544 494 aaPredicted RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 PTH1RQ03431 593 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 KCNC3Q14003 757 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 RNF20Q5VTR2 975 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 LINC01599Q8WXQ3 324 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 P2RX5Q93086 422 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 SPATA33Q96N06 139 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 PLVAPQ9BX97 442 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 LSG1Q9H089 658 aaKnown RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 SETD4Q9NVD3 440 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 CDH22Q9UJ99 828 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 MRVI1Q9Y6F6 885 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 RIF1Q5UIP0 2472 aaKnown RBP11.35□□□□□ -0.59
SRSF4-205ENST00000497015 NEDD4P46934 1319 aa11.35□□□□□ -0.59
SRSF4-205ENST00000497015 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 H3BRB1 525 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 BRD1O95696 1058 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 BTG3Q14201 252 aaPredicted RBP11.34□□□□□ -0.59
SRSF4-205ENST00000497015 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
SRSF4-205ENST00000497015 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 POF1BQ8WVV4 589 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 APBB2Q92870 758 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 TUT1Q9H6E5 874 aaKnown RBP11.34□□□□□ -0.59
SRSF4-205ENST00000497015 ANO2Q9NQ90 1003 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 RWDD3Q9Y3V2 267 aa11.34□□□□□ -0.59
SRSF4-205ENST00000497015 RBM8AQ9Y5S9 174 aaKnown RBP11.34□□□□□ -0.59
SRSF4-205ENST00000497015 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 WDR87Q6ZQQ6 2873 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 PI15O43692 258 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 REC8O95072 547 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 GGPS1O95749 300 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 GHRP10912 638 aa11.33□□□□□ -0.6
SRSF4-205ENST00000497015 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
SRSF4-205ENST00000497015 GATMP50440 423 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms