RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SMAD2Q15796 467 aaKnown RBP5.54□□□□□ -1.52
CLK1-214ENST00000496205 Q6ZSN1 163 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 ZNF227Q86WZ6 799 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 RBM12BQ8IXT5 1001 aaKnown RBP5.54□□□□□ -1.52
CLK1-214ENST00000496205 PPIL6Q8IXY8 311 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 GIMAP8Q8ND71 665 aaPredicted RBP5.54□□□□□ -1.52
CLK1-214ENST00000496205 SH3TC2Q8TF17 1288 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 EDAQ92838 391 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 CEP89Q96ST8 783 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 DLL4Q9NR61 685 aa5.54□□□□□ -1.52
CLK1-214ENST00000496205 WDR33Q9C0J8 1336 aaKnown RBP5.53□□□□□ -1.52
CLK1-214ENST00000496205 SLC27A2O14975 620 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 NCAPHQ15003 741 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 VASNQ6EMK4 673 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 FUKQ8N0W3 1084 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 PHOSPHO1Q8TCT1 267 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 C1orf159Q96HA4 380 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 JAM3Q9BX67 310 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 KATNBL1Q9H079 304 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 CSRNP2Q9H175 543 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 EPB41L1Q9H4G0 881 aa5.53□□□□□ -1.52
CLK1-214ENST00000496205 ESYT3A0FGR9 886 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 SUSD5O60279 629 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 ZNF888P0CJ79 500 aaPredicted RBP5.52□□□□□ -1.53
CLK1-214ENST00000496205 COMTP21964 271 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 GLRBP48167 497 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 PTH1RQ03431 593 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 DPTQ07507 201 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 SKIDA1Q1XH10 827 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 LSM12Q3MHD2 195 aaKnown RBP5.52□□□□□ -1.53
CLK1-214ENST00000496205 STPG3Q8N7X2 389 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 TMEM145Q8NBT3 493 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 TTLL11Q8NHH1 800 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 PIP4K2CQ8TBX8 421 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 NEIL1Q96FI4 390 aaPredicted RBP5.52□□□□□ -1.53
CLK1-214ENST00000496205 TRIM8Q9BZR9 551 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 ZFP69BQ9UJL9 534 aa5.52□□□□□ -1.53
CLK1-214ENST00000496205 ENPP3O14638 875 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 ADCY3O60266 1144 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 CPP00450 1065 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 CHGBP05060 677 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 KCNJ6P48051 423 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 GFRA1P56159 465 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 SV2CQ496J9 727 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 MTERF2Q49AM1 385 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 AMER2Q8N7J2 671 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 JMYQ8N9B5 988 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 SLC6A20Q9NP91 592 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 KCND1Q9NSA2 647 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 PPARGC1AQ9UBK2 798 aaKnown RBP5.51□□□□□ -1.53
CLK1-214ENST00000496205 SBNO2Q9Y2G9 1366 aa5.51□□□□□ -1.53
CLK1-214ENST00000496205 IL18BPO95998 194 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 LTFP02788 710 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 CAPNS1P04632 268 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 C1SP09871 688 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 ACO1P21399 889 aaKnown RBP5.5□□□□□ -1.53
CLK1-214ENST00000496205 PURAQ00577 322 aaKnown RBP5.5□□□□□ -1.53
CLK1-214ENST00000496205 IFRD2Q12894 506 aaPredicted RBP5.5□□□□□ -1.53
CLK1-214ENST00000496205 FOXB2Q5VYV0 432 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 CYP4F22Q6NT55 531 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 ST13P5Q8NFI4 369 aaPredicted RBP5.5□□□□□ -1.53
CLK1-214ENST00000496205 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 FANCLQ9NW38 375 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 LRP2BPQ9P2M1 347 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
CLK1-214ENST00000496205 NPFFR2Q9Y5X5 522 aa5.5□□□□□ -1.53
CLK1-214ENST00000496205 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 MSCO60682 206 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 FBXO21O94952 628 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 FAM153BP0C7A2 387 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 FAHP16930 419 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 MCM7P33993 719 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 PFKPQ01813 784 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 SSRP1Q08945 709 aaKnown RBP5.49□□□□□ -1.53
CLK1-214ENST00000496205 NOLC1Q14978 699 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLK1-214ENST00000496205 TKFCQ3LXA3 575 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 C2orf27AQ580R0 203 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 SLC35F1Q5T1Q4 408 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 TRIM48Q8IWZ4 208 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 IFNL2Q8IZJ0 200 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 IL17DQ8TAD2 202 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 ARHGAP20Q9P2F6 1191 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 TELO2Q9Y4R8 837 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 PTCH2Q9Y6C5 1203 aa5.49□□□□□ -1.53
CLK1-214ENST00000496205 KRIT1O00522 736 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 MAFKO60675 156 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 RAD17O75943 681 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 HSD3B2P26439 372 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 GRIA2P42262 883 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 NANOS3P60323 173 aaKnown RBP5.48□□□□□ -1.53
CLK1-214ENST00000496205 TUSC3Q13454 348 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 USP10Q14694 798 aaKnown RBP5.48□□□□□ -1.53
CLK1-214ENST00000496205 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 PAN2Q504Q3 1202 aaKnown RBP5.48□□□□□ -1.53
CLK1-214ENST00000496205 YOD1Q5VVQ6 348 aaPredicted RBP5.48□□□□□ -1.53
CLK1-214ENST00000496205 EEPD1Q7L9B9 569 aa5.48□□□□□ -1.53
CLK1-214ENST00000496205 C1orf210Q8IVY1 113 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms