RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 EPHA7Q15375 998 aa15.17■□□□□ 0.02
PTPN7-218ENST00000496197 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
PTPN7-218ENST00000496197 SWSAP1Q6NVH7 229 aa15.17■□□□□ 0.02
PTPN7-218ENST00000496197 HSD17B14Q9BPX1 270 aa15.17■□□□□ 0.02
PTPN7-218ENST00000496197 GABBR1Q9UBS5 961 aa15.17■□□□□ 0.02
PTPN7-218ENST00000496197 TRIP12Q14669 1992 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-218ENST00000496197 A0A087X0B3 334 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 POTEB3A0JP26 581 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 TMEM150BA6NC51 233 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 CUTAO60888 179 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 SLITRK3O94933 977 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 MYL3P08590 195 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 SFNP31947 248 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 LONP1P36776 959 aaKnown RBP15.16■□□□□ 0.02
PTPN7-218ENST00000496197 DGKDQ16760 1214 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 MIS18BP1Q6P0N0 1132 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 POTEBQ6S5H4 581 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 CXCL17Q6UXB2 119 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 CATSPER3Q86XQ3 398 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 DIS3LQ8TF46 1054 aaKnown RBP15.16■□□□□ 0.02
PTPN7-218ENST00000496197 SYMPKQ92797 1274 aaKnown RBP15.16■□□□□ 0.02
PTPN7-218ENST00000496197 LOXHD1Q8IVV2 1947 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 DNAH12Q6ZR08 3092 aa15.16■□□□□ 0.02
PTPN7-218ENST00000496197 KIAA0100Q14667 2235 aaKnown RBP15.16■□□□□ 0.02
PTPN7-218ENST00000496197 ALPK3Q96L96 1907 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 ZBTB39O15060 712 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 GADD45BO75293 160 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-218ENST00000496197 PPFIA4O75335 1185 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 STBD1O95210 358 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 PSAPP07602 524 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 MARK3P27448 753 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 PSMC6P62333 389 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
PTPN7-218ENST00000496197 RNF180Q86T96 592 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 RDM1Q8NG50 284 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 SNX29Q8TEQ0 813 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 PNMA5Q96PV4 448 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 LXNQ9BS40 222 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 RNPEPQ9H4A4 650 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 TCEAL9Q9UHQ7 104 aa15.15■□□□□ 0.02
PTPN7-218ENST00000496197 MAFBQ9Y5Q3 323 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-218ENST00000496197 BACH1O14867 736 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 F2P00734 622 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 TFRCP02786 760 aaKnown RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 STAT5BP51692 787 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 ACLYP53396 1101 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 GRB10Q13322 594 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 KARSQ15046 597 aaKnown RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 KCNK18Q7Z418 384 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 TMEM87AQ8NBN3 555 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 ABHD8Q96I13 439 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 PLIN2Q99541 437 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 SH2D3AQ9BRG2 576 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 KAT6AQ92794 2004 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 GRIN2DO15399 1336 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 A0A1W2PQ45 241 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 A0A1W2PQY0 241 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 H3BRB1 525 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 HAS3O00219 553 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 DNM1LO00429 736 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 P4HBP07237 508 aaKnown RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 EN2P19622 333 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 RPA1P27694 616 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 CCT6AP40227 531 aaKnown RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 HIC1Q14526 733 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 RESP18Q5W5W9 173 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 ADALQ6DHV7 355 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 PDXDC2PQ6P474 469 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 CABP7Q86V35 215 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 TPH2Q8IWU9 490 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 GLG1Q92896 1179 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 AK8Q96MA6 479 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 POLR3CQ9BUI4 534 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 RAB34Q9BZG1 259 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 TUT1Q9H6E5 874 aaKnown RBP15.14■□□□□ 0.01
PTPN7-218ENST00000496197 PHF24Q9UPV7 400 aa15.14■□□□□ 0.01
PTPN7-218ENST00000496197 QARSP47897 775 aaKnown RBP15.13■□□□□ 0.01
PTPN7-218ENST00000496197 PSMC5P62195 406 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 PRKCEQ02156 737 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 PLCB4Q15147 1175 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 ZRSR1Q15695 479 aaKnown RBP15.13■□□□□ 0.01
PTPN7-218ENST00000496197 HYIQ5T013 277 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 PLPPR4Q7Z2D5 763 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 PCSK9Q8NBP7 692 aaKnown RBP15.13■□□□□ 0.01
PTPN7-218ENST00000496197 ARRDC4Q8NCT1 418 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 CCSER1Q9C0I3 900 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 SMARCAD1Q9H4L7 1026 aa15.13■□□□□ 0.01
PTPN7-218ENST00000496197 MKI67P46013 3256 aaKnown RBP15.13■□□□□ 0.01
PTPN7-218ENST00000496197 EVPLQ92817 2033 aa15.12■□□□□ 0.01
PTPN7-218ENST00000496197 A0A1B0GVL5 298 aa15.12■□□□□ 0.01
PTPN7-218ENST00000496197 KBTBD13C9JR72 458 aa15.12■□□□□ 0.01
PTPN7-218ENST00000496197 RBAK-RBAKDNI3L0D1 243 aa15.12■□□□□ 0.01
PTPN7-218ENST00000496197 PSEN2P49810 448 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms