RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PTPN21Q16825 1174 aa7.26□□□□□ -1.25
SSR3-208ENST00000496050 FUBP3Q96I24 572 aaKnown RBP eCLIP7.26□□□□□ -1.25
SSR3-208ENST00000496050 KIRREL1Q96J84 757 aa7.26□□□□□ -1.25
SSR3-208ENST00000496050 ZDHHC5Q9C0B5 715 aa7.26□□□□□ -1.25
SSR3-208ENST00000496050 RNF32Q9H0A6 362 aa7.26□□□□□ -1.25
SSR3-208ENST00000496050 C14orf119Q9NWQ9 140 aa7.26□□□□□ -1.25
SSR3-208ENST00000496050 GEMIN8Q9NWZ8 242 aaKnown RBP7.26□□□□□ -1.25
SSR3-208ENST00000496050 TELO2Q9Y4R8 837 aa7.26□□□□□ -1.25
SSR3-208ENST00000496050 ABLIM1O14639 778 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 FOXP2O15409 715 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 AKAP10O43572 662 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 HYAL3O43820 417 aaPredicted RBP7.25□□□□□ -1.25
SSR3-208ENST00000496050 ADAM23O75077 832 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 C4BPAP04003 597 aaKnown RBP7.25□□□□□ -1.25
SSR3-208ENST00000496050 MYBL2P10244 700 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 SCAND1P57086 179 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 HERVK_113P62684 666 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 PRR5P85299 388 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 GRIN1Q05586 938 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 LRP8Q14114 963 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 RAB3GAP1Q15042 981 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 EPHA7Q15375 998 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 INAVAQ3KP66 663 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 FSTL4Q6MZW2 842 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 PGM2L1Q6PCE3 622 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 RAVER1Q8IY67 606 aaKnown RBP7.25□□□□□ -1.25
SSR3-208ENST00000496050 FLAD1Q8NFF5 587 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 TTLL11Q8NHH1 800 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 SLC6A17Q9H1V8 727 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 TOPORSQ9NS56 1045 aaPredicted RBP7.25□□□□□ -1.25
SSR3-208ENST00000496050 FAN1Q9Y2M0 1017 aa7.25□□□□□ -1.25
SSR3-208ENST00000496050 PRAMEF25A6NGN4 478 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 PDE6BP35913 854 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 MAPKAPK2P49137 400 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 PAN2Q504Q3 1202 aaKnown RBP7.24□□□□□ -1.25
SSR3-208ENST00000496050 ZMYM1Q5SVZ6 1142 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 ADGRF1Q5T601 910 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 CHPFQ8IZ52 775 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 CBARPQ8N350 705 aaPredicted RBP7.24□□□□□ -1.25
SSR3-208ENST00000496050 ARRDC4Q8NCT1 418 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 E2F7Q96AV8 911 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 HOOK2Q96ED9 719 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 TSPAN17Q96FV3 270 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 FAXDC2Q96IV6 333 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 C16orf92Q96LL3 132 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 GBP4Q96PP9 640 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 SLC13A1Q9BZW2 595 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 ZMAT4Q9H898 229 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 ZIM2Q9NZV7 527 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 USP36Q9P275 1121 aaKnown RBP7.24□□□□□ -1.25
SSR3-208ENST00000496050 MRFAP1Q9Y605 127 aa7.24□□□□□ -1.25
SSR3-208ENST00000496050 OR14I1A6ND48 311 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 ACOT7O00154 380 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 TSPAN6O43657 245 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 SNUPNO95149 360 aaKnown RBP7.23□□□□□ -1.25
SSR3-208ENST00000496050 FAHP16930 419 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 CATSPEREQ5SY80 951 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 ATG4DQ86TL0 474 aaPredicted RBP7.23□□□□□ -1.25
SSR3-208ENST00000496050 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 LMBR1Q8WVP7 490 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 INTS4Q96HW7 963 aaKnown RBP7.23□□□□□ -1.25
SSR3-208ENST00000496050 ACAP3Q96P50 834 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 CAMKK2Q96RR4 588 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 NGRNQ9NPE2 291 aaKnown RBP7.23□□□□□ -1.25
SSR3-208ENST00000496050 MKS1Q9NXB0 559 aa7.23□□□□□ -1.25
SSR3-208ENST00000496050 KDM1AO60341 852 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 SDHBP21912 280 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 PIN1Q13526 163 aaPredicted RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 ABCB5Q2M3G0 1257 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 FYB2Q5VWT5 728 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 OLFML2BQ68BL8 750 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 TIGD7Q6NT04 549 aaPredicted RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 ZC3H14Q6PJT7 736 aaKnown RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 RPTNQ6XPR3 784 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 PNMA8AQ86V59 439 aaPredicted RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 ABI1Q8IZP0 508 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 C1orf162Q8NEQ5 155 aaPredicted RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 RTF1Q92541 710 aaKnown RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 TOE1Q96GM8 510 aaKnown RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 ZNF496Q96IT1 587 aaPredicted RBP7.22□□□□□ -1.25
SSR3-208ENST00000496050 KLHL14Q9P2G3 628 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 MSRAQ9UJ68 235 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 ZNF180Q9UJW8 692 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 ASB1Q9Y576 335 aa7.22□□□□□ -1.25
SSR3-208ENST00000496050 GOLGA6L22H0YM25 854 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 BIN1O00499 593 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 MT-CO1P00395 513 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 RBP3P10745 1247 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 IARSP41252 1262 aaKnown RBP7.21□□□□□ -1.26
SSR3-208ENST00000496050 GP2P55259 537 aaKnown RBP7.21□□□□□ -1.26
SSR3-208ENST00000496050 ESRP1Q6NXG1 681 aaKnown RBP7.21□□□□□ -1.26
SSR3-208ENST00000496050 ESPNLQ6ZVH7 1005 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 WDR75Q8IWA0 830 aaKnown RBP7.21□□□□□ -1.26
SSR3-208ENST00000496050 HIPK4Q8NE63 616 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 ERCC4Q92889 916 aaPredicted RBP7.21□□□□□ -1.26
SSR3-208ENST00000496050 TSR2Q969E8 191 aaKnown RBP7.21□□□□□ -1.26
SSR3-208ENST00000496050 DDX11Q96FC9 970 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 C8orf48Q96LL4 319 aa7.21□□□□□ -1.26
SSR3-208ENST00000496050 PCGF6Q9BYE7 350 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms