RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 LIG1P18858 919 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 SDSP20132 328 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 CNGA1P29973 690 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 NTF4P34130 210 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 SLC7A5Q01650 507 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 CALD1Q05682 793 aaKnown RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 C19orf57Q0VDD7 668 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 MOGSQ13724 837 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 VGLL4Q14135 290 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 GCKRQ14397 625 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 ARHGEF6Q15052 776 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 POU4F3Q15319 338 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 CCDC30Q5VVM6 783 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 KSR2Q6VAB6 950 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 C20orf204Q6ZNR8 217 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 C15orf52Q6ZUT6 534 aaKnown RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 NECAB2Q7Z6G3 386 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 C12orf40Q86WS4 652 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 APOBEC3FQ8IUX4 373 aaKnown RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 TMEM192Q8IY95 271 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 VWA5B2Q8N398 1253 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 SLC7A3Q8WY07 619 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 PRMT6Q96LA8 375 aaPredicted RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 KIF2CQ99661 725 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 TARS2Q9BW92 718 aaKnown RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 COA1Q9GZY4 146 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 KLHL3Q9UH77 587 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 ADAM30Q9UKF2 790 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 MRPS23Q9Y3D9 190 aaKnown RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 MAST2Q6P0Q8 1798 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 CHD9Q3L8U1 2897 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 LOC285556D6RIA3 1793 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CCDC163A0A0D9SF12 145 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 LINC01387J3KSC0 135 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 SNAP23O00161 211 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 PLD2O14939 933 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 PPFIA3O75145 1194 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 EYA4O95677 639 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CYP11A1P05108 521 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CSF1RP07333 972 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 FOSL2P15408 326 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 ADH6P28332 368 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 FLT3LGP49771 235 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 PRMT2P55345 433 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 TBX4P57082 545 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CHRNDQ07001 517 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 SHHQ15465 462 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 LRRC26Q2I0M4 334 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 TWISTNBQ3B726 338 aaPredicted RBP5.3□□□□□ -1.56
VPS52-222ENST00000495981 GNPTABQ3T906 1256 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 FNDC3BQ53EP0 1204 aaKnown RBP5.3□□□□□ -1.56
VPS52-222ENST00000495981 STRA8Q7Z7C7 330 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 IL22RA1Q8N6P7 574 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 NUDT8Q8WV74 236 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 NANOS1Q8WY41 292 aaKnown RBP5.3□□□□□ -1.56
VPS52-222ENST00000495981 WNT8BQ93098 351 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 TEPSINQ96N21 525 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 TRERF1Q96PN7 1200 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 UHRF1Q96T88 793 aaPredicted RBP5.3□□□□□ -1.56
VPS52-222ENST00000495981 CORO1BQ9BR76 489 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 DHRS4Q9BTZ2 278 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 LGR4Q9BXB1 951 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CSADQ9Y600 493 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 REV3LO60673 3130 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CHD8Q9HCK8 2581 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 DOCK1Q14185 1865 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 CHD7Q9P2D1 2997 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 PHIPQ8WWQ0 1821 aa5.3□□□□□ -1.56
VPS52-222ENST00000495981 RFX7Q2KHR2 1363 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 RPAP1Q9BWH6 1393 aaPredicted RBP5.29□□□□□ -1.56
VPS52-222ENST00000495981 ZDBF2Q9HCK1 2354 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 ALPK3Q96L96 1907 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 ELOA3CA0A087WX78 387 aaPredicted RBP5.29□□□□□ -1.56
VPS52-222ENST00000495981 LOC102724159A0A0B4J2E5 919 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 PRAMEF27A3QJZ7 478 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 ELOA3DA6NLF2 546 aaPredicted RBP5.29□□□□□ -1.56
VPS52-222ENST00000495981 C9IYK1 514 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 FSCN2O14926 492 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 CBFA2T2O43439 604 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 UBOX5O94941 541 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 PGRP06401 933 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 CYP2C8P10632 490 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 BCRP11274 1271 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 IL1R1P14778 569 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 CCNFP41002 786 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 GRIA2P42262 883 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 MRE11P49959 708 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 GTF2A2P52657 109 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 PMS1P54277 932 aaKnown RBP5.29□□□□□ -1.56
VPS52-222ENST00000495981 UBXN2AP68543 259 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 FOXO4P98177 505 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 NFKB2Q00653 900 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 KIF22Q14807 665 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 PWP2Q15269 919 aaKnown RBP5.29□□□□□ -1.56
VPS52-222ENST00000495981 ELOA3BQ3SY89 546 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 EPHA10Q5JZY3 1008 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 CACTIN-AS1Q8N1I8 211 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 LINS1Q8NG48 757 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 ELOA3Q8NG57 546 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 DNAAF4Q8WXU2 420 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms