RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 PDGFCQ9NRA1 345 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 FLRT1Q9NZU1 646 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 PCDHA5Q9Y5H7 936 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 SMC2O95347 1197 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 GNRH1P01148 92 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 PSMC5P62195 406 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 SASS6Q6UVJ0 657 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 ERCC4Q92889 916 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 GSDMAQ96QA5 445 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 MLXIPQ9HAP2 919 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 DOCK3Q8IZD9 2030 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 MGAMO43451 1857 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 IGKV6D-21A0A0A0MT36 114 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 E9PMD0 336 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.355e-10■■■■□ 24.7
SLC13A3-211ENST00000495082 EYA4O95677 639 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 HOXD10P28358 340 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 FLT3LGP49771 235 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 PSMC6P62333 389 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 MCM6Q14566 821 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 CCL14Q16627 93 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 TRMT44Q8IYL2 757 aaKnown RBP12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 SYT2Q8N9I0 419 aaPredicted RBP12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 BANK1Q8NDB2 785 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 ATP6V0A1Q93050 837 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 MCM3APO60318 1980 aa12.86□□□□□ -0.35
SLC13A3-211ENST00000495082 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 CAP1Q01518 475 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 PRKCZQ05513 592 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 TYRO3Q06418 890 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 CUL4BQ13620 913 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 LAMC2Q13753 1193 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 DUSP28Q4G0W2 176 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 DHX37Q8IY37 1157 aaKnown RBP12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 SEPT1Q8WYJ6 367 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 STAMQ92783 540 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 ERO1AQ96HE7 468 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 ZHX1Q9UKY1 873 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 GABRQQ9UN88 632 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 GH1P01241 217 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 ZNF865P0CJ78 1059 aaPredicted RBP12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 CYP2C19P33261 490 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 ADCYAP1R1P41586 468 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 SP4Q02446 784 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 ARHGAP1Q07960 439 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 UGCGQ16739 394 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 SPATA33Q96N06 139 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 GPR20Q99678 358 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 TELO2Q9Y4R8 837 aa12.85□□□□□ -0.35
SLC13A3-211ENST00000495082 IGSF9BQ9UPX0 1349 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 MYMKA6NI61 221 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 FKTNO75072 461 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 CASP1P29466 404 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 ARHGEF6Q15052 776 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 STX1AQ16623 288 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 CCDC144BQ3MJ40 725 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 SWSAP1Q6NVH7 229 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 AFAP1L1Q8TED9 768 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 COPS5Q92905 334 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 BHMT2Q9H2M3 363 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 GABBR1Q9UBS5 961 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 MAN1B1Q9UKM7 699 aa12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 MAFBQ9Y5Q3 323 aaPredicted RBP12.84□□□□□ -0.35
SLC13A3-211ENST00000495082 PVALEFA0A1B0GWK0 134 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 NOP56O00567 594 aaKnown RBP12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 SORBS3O60504 671 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 LGR5O75473 907 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 CAVIN2O95810 425 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 SMPD1P17405 629 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 CYP11B2P19099 503 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 MORC3Q14149 939 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 KCNB1Q14721 858 aa12.83□□□□□ -0.36
SLC13A3-211ENST00000495082 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms