RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PCYT2Q99447 389 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 RIC8AQ9NPQ8 531 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 KCNH7Q9NS40 1196 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 SLC9A2Q9UBY0 812 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 CDY2AQ9Y6F7 541 aa25.26■■□□□ 1.63
HDDC3-203ENST00000494993 MYH9P35579 1960 aaKnown RBP25.25■■□□□ 1.63
HDDC3-203ENST00000494993 EVPLQ92817 2033 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 RRN3P2A6NIE6 340 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 IGBP1P78318 339 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 EXOSC10Q01780 885 aaKnown RBP25.25■■□□□ 1.63
HDDC3-203ENST00000494993 FBXO47Q5MNV8 452 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 FIBCD1Q8N539 461 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 TCEANC2Q96MN5 208 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 EPHX3Q9H6B9 360 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 NFASCO94856 1347 aa25.25■■□□□ 1.63
HDDC3-203ENST00000494993 ZBTB43O43298 467 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 RPLP2P05387 115 aaKnown RBP25.24■■□□□ 1.63
HDDC3-203ENST00000494993 INSRRP14616 1297 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 FUT2Q10981 343 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 RTN1Q16799 776 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 TSHZ1Q6ZSZ6 1077 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 BANK1Q8NDB2 785 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.24■■□□□ 1.63
HDDC3-203ENST00000494993 CYP2W1Q8TAV3 490 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 PGBD1Q96JS3 809 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 AZI2Q9H6S1 392 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 RC3H2Q9HBD1 1191 aaKnown RBP25.24■■□□□ 1.63
HDDC3-203ENST00000494993 BRPF3Q9ULD4 1205 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 WDR81Q562E7 1941 aa25.24■■□□□ 1.63
HDDC3-203ENST00000494993 ADGRA3Q8IWK6 1321 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 hCG_1984214I3L0E3 225 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 ENPP3O14638 875 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 FOSP01100 380 aaPredicted RBP25.23■■□□□ 1.63
HDDC3-203ENST00000494993 CTNNB1P35222 781 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 ADCY7P51828 1080 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 MRPS6P82932 125 aaKnown RBP25.23■■□□□ 1.63
HDDC3-203ENST00000494993 DHX32Q7L7V1 743 aaKnown RBP25.23■■□□□ 1.63
HDDC3-203ENST00000494993 ZNF713Q8N859 430 aaPredicted RBP25.23■■□□□ 1.63
HDDC3-203ENST00000494993 ZBTB10Q96DT7 871 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 SDF4Q9BRK5 362 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 ANO3Q9BYT9 981 aa25.23■■□□□ 1.63
HDDC3-203ENST00000494993 C5orf67F2Z3F1 127 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 STXBP3O00186 592 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 ARP10275 920 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 ACTR2P61160 394 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 TSGA10IPQ3SY00 556 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 CEP55Q53EZ4 464 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 TCEAL5Q5H9L2 206 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 SKAP1Q86WV1 359 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 KHSRPQ92945 711 aaKnown RBP eCLIP25.22■■□□□ 1.63
HDDC3-203ENST00000494993 TNPO1Q92973 898 aaKnown RBP25.22■■□□□ 1.63
HDDC3-203ENST00000494993 FAM49AQ9H0Q0 323 aaPredicted RBP25.22■■□□□ 1.63
HDDC3-203ENST00000494993 NSUN3Q9H649 340 aaKnown RBP25.22■■□□□ 1.63
HDDC3-203ENST00000494993 CD320Q9NPF0 282 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 TRPC6Q9Y210 931 aa25.22■■□□□ 1.63
HDDC3-203ENST00000494993 V9GY48 417 aaPredicted RBP25.22■■□□□ 1.63
HDDC3-203ENST00000494993 RB1P06400 928 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 LINC00271P0C7V0 271 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 PLCB4Q15147 1175 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 ADCK5Q3MIX3 580 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 IER5Q5VY09 327 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 PLPPR4Q7Z2D5 763 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 FAM178BQ8IXR5 827 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 RASEFQ8IZ41 740 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 NEK9Q8TD19 979 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 AGO3Q9H9G7 860 aaKnown RBP25.21■■□□□ 1.63
HDDC3-203ENST00000494993 RWDD3Q9Y3V2 267 aa25.21■■□□□ 1.63
HDDC3-203ENST00000494993 SMCO2A6NFE2 343 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 GOLGA8AA7E2F4 631 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 GOLGA8BA8MQT2 603 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 IL9P15248 144 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 CD52P31358 61 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 BMPR1AP36894 532 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 CLK2P49760 499 aaKnown RBP25.2■■□□□ 1.62
HDDC3-203ENST00000494993 STAT5BP51692 787 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 ITGB3BPQ13352 177 aaPredicted RBP25.2■■□□□ 1.62
HDDC3-203ENST00000494993 AP3B2Q13367 1082 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 PTCRAQ6ISU1 281 aaPredicted RBP25.2■■□□□ 1.62
HDDC3-203ENST00000494993 ZNF689Q96CS4 500 aaPredicted RBP25.2■■□□□ 1.62
HDDC3-203ENST00000494993 AGO4Q9HCK5 861 aaKnown RBP25.2■■□□□ 1.62
HDDC3-203ENST00000494993 BARHL2Q9NY43 387 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 PCDHA2Q9Y5H9 948 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 TRPV2Q9Y5S1 764 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 SQORQ9Y6N5 450 aa25.2■■□□□ 1.62
HDDC3-203ENST00000494993 KLF18A0A0U1RQI7 1052 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 MEIS1O00470 390 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 SREBF1P36956 1147 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 TRAPPC12Q8WVT3 735 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 LINC01599Q8WXQ3 324 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 CLP1Q92989 425 aaKnown RBP25.19■■□□□ 1.62
HDDC3-203ENST00000494993 PABPC5Q96DU9 382 aaKnown RBP25.19■■□□□ 1.62
HDDC3-203ENST00000494993 LRFN3Q9BTN0 628 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 C11orf84Q9BUA3 381 aaPredicted RBP25.19■■□□□ 1.62
HDDC3-203ENST00000494993 GLT8D2Q9H1C3 349 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 FAM217BQ9NTX9 383 aaPredicted RBP25.19■■□□□ 1.62
HDDC3-203ENST00000494993 TMEM260Q9NX78 707 aa25.19■■□□□ 1.62
HDDC3-203ENST00000494993 H3BQ06 376 aaPredicted RBP25.18■■□□□ 1.62
HDDC3-203ENST00000494993 M0QZ92 97 aa25.18■■□□□ 1.62
HDDC3-203ENST00000494993 ATG7O95352 703 aa25.18■■□□□ 1.62
HDDC3-203ENST00000494993 CDC27P30260 824 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms