RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 LYPLA2O95372 231 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 PYGBP11216 843 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 JAK3P52333 1124 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 PMS1P54277 932 aaKnown RBP12.77□□□□□ -0.37
HDLBP-245ENST00000494862 KRT76Q01546 638 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 CENPPQ6IPU0 288 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 NCAPG2Q86XI2 1143 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 C2orf69Q8N8R5 385 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 DUSP9Q99956 384 aaKnown RBP12.77□□□□□ -0.37
HDLBP-245ENST00000494862 SENP7Q9BQF6 1050 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 ZSWIM4Q9H7M6 989 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 TCEAL9Q9UHQ7 104 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 PCDHA2Q9Y5H9 948 aa12.77□□□□□ -0.37
HDLBP-245ENST00000494862 TRIM49BA6NDI0 452 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 WDR64B1ANS9 1081 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 ATP9AO75110 1047 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 KIF20AO95235 890 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 FGFR1OPO95684 399 aaKnown RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 CETPP11597 493 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 SFNP31947 248 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 COPB1P53618 953 aaKnown RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 KRT31Q15323 416 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 STXBP2Q15833 593 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 HERC4Q5GLZ8 1057 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 ZNF746Q6NUN9 644 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 IRF2BP1Q8IU81 584 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 MYOCDQ8IZQ8 938 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 LXNQ9BS40 222 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 SEMA6BQ9H3T3 888 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 KCND2Q9NZV8 630 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
HDLBP-245ENST00000494862 SLC45A1Q9Y2W3 748 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 NFASCO94856 1347 aa12.76□□□□□ -0.37
HDLBP-245ENST00000494862 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 PEX10O60683 326 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 TBCAO75347 108 aaKnown RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 KCNA2P16389 499 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 GAP43P17677 238 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 ERCC3P19447 782 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 ICAM3P32942 547 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 QARSP47897 775 aaKnown RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 ALDH5A1P51649 535 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 GTF2A2P52657 109 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 CNTN2Q02246 1040 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 LRRC63Q05C16 580 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 C1orf186Q6ZWK4 172 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 FAM114A1Q8IWE2 563 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 SHCBP1Q8NEM2 672 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 CACTINQ8WUQ7 758 aaKnown RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 TSG101Q99816 390 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 DBR1Q9UK59 544 aaKnown RBP12.75□□□□□ -0.37
HDLBP-245ENST00000494862 COL4A3BPQ9Y5P4 624 aa12.75□□□□□ -0.37
HDLBP-245ENST00000494862 ARHGEF35A5YM69 484 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 B4DLN1 442 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 RGS20O76081 388 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 CELF2O95319 508 aaKnown RBP12.74□□□□□ -0.37
HDLBP-245ENST00000494862 CCNE2O96020 404 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 EDNRBP24530 442 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 GUCY2CP25092 1073 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 CLCN1P35523 988 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-245ENST00000494862 LRRC41Q15345 812 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 C4orf19Q8IY42 314 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 ZHX3Q9H4I2 956 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 MROH8Q9H579 483 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 TXNRD2Q9NNW7 524 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 SAMM50Q9Y512 469 aa12.74□□□□□ -0.37
HDLBP-245ENST00000494862 ASTN1O14525 1302 aa12.73□□□□□ -0.37
HDLBP-245ENST00000494862 CCL15-CCL14A0A0B4J2E2 113 aa12.73□□□□□ -0.37
HDLBP-245ENST00000494862 N4BP3O15049 544 aa12.73□□□□□ -0.37
HDLBP-245ENST00000494862 TEX33O43247 280 aa12.73□□□□□ -0.37
HDLBP-245ENST00000494862 DKC1O60832 514 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms