RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 IRF2BP1Q8IU81 584 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 ZFP91Q96JP5 570 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 TMX1Q9H3N1 280 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 RGL1Q9NZL6 768 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 SPDYE5A6NIY4 337 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 CXCL11O14625 94 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 CHMP2AO43633 222 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 ZRANB2O95218 330 aaKnown RBP eCLIP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 KRT18P05783 430 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 MTMR1Q13613 665 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 ARSHQ5FYA8 562 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 ARHGEF16Q5VV41 709 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 ANKRD40Q6AI12 368 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 FAM114A1Q8IWE2 563 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 MB21D1Q8N884 522 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 UBXN4Q92575 508 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 ELP3Q9H9T3 547 aa20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 AGO4Q9HCK5 861 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-212ENST00000494815 PBX1P40424 430 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 COPB1P53618 953 aaKnown RBP20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 LRRC63Q05C16 580 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 TREML2Q5T2D2 321 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 PNMA8AQ86V59 439 aaPredicted RBP20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 TBC1D22BQ9NU19 505 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 IRF6O14896 467 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 N4BP3O15049 544 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 MYOCDQ8IZQ8 938 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 DYDC2Q96IM9 177 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 BHMT2Q9H2M3 363 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 SEMA6BQ9H3T3 888 aa20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 MAGEC2Q9UBF1 373 aaPredicted RBP20.52■□□□□ 0.88
TSPAN4-212ENST00000494815 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 DHX15O43143 795 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 TEX33O43247 280 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 PLA2G4AP47712 749 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 CTTNQ14247 550 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 TMCO3Q6UWJ1 677 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 LBX2Q6XYB7 198 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 TPH2Q8IWU9 490 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 MNS1Q8NEH6 495 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 NSUN6Q8TEA1 469 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 OTUD5Q96G74 571 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 ITIH6Q6UXX5 1313 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 TADA3O75528 432 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 CCND2P30279 289 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 GIT2Q14161 759 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 TTLL12Q14166 644 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 HERC4Q5GLZ8 1057 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 REXO1L1PQ8IX06 675 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 CHST13Q8NET6 341 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 CLMNQ96JQ2 1002 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 NACC1Q96RE7 527 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 CYP39A1Q9NYL5 469 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 CALCOCO1Q9P1Z2 691 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 PCDHA2Q9Y5H9 948 aa20.51■□□□□ 0.87
TSPAN4-212ENST00000494815 TPM1P09493 284 aa20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 MYCLP12524 364 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 CYP2C19P33261 490 aa20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 PPIL2Q13356 520 aa20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 EAPPQ56P03 285 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 ARMC9Q7Z3E5 817 aa20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 VSIG10LQ86VR7 867 aa20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 A1CFQ9NQ94 594 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-212ENST00000494815 NPHP3-ACAD11A0A0J9YXS1 232 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 EFCAB8A8MWE9 144 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 FGFR1OPO95684 399 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 ITGB3BPQ13352 177 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 PLS1Q14651 629 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 REEP2Q9BRK0 252 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 TAB2Q9NYJ8 693 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 A0A0G2JMZ2 1700 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 ERICH4A6NGS2 130 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 MAFGO15525 162 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 ZSCAN12O43309 604 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 NR3C2P08235 984 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 PTPN21Q16825 1174 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 GADL1Q6ZQY3 521 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 MIER3Q7Z3K6 550 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 GPRASP2Q96D09 838 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 TSG101Q99816 390 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 VPS16Q9H269 839 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
TSPAN4-212ENST00000494815 FANCGO15287 622 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 LXNQ9BS40 222 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 FBXO40Q9UH90 709 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 LGALS16A8MUM7 142 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 ATP8B1O43520 1251 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 STAM2O75886 525 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 URI1O94763 535 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 CACNB1Q02641 598 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 MOB2Q70IA6 237 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 PIGOQ8TEQ8 1089 aa20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 INPP4AQ96PE3 977 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-212ENST00000494815 RUSC1Q9BVN2 902 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms