RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 RRP9O43818 475 aaKnown RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 GAS7O60861 476 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 SRGAP2O75044 1071 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 NOL4O94818 638 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 RPS6P62753 249 aaKnown RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 COBLL1Q53SF7 1204 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ZSWIM2Q8NEG5 633 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ZNF446Q9NWS9 450 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 IPO5O00410 1097 aaKnown RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ICAM1P05362 532 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 PNMA6AP0CW24 399 aaPredicted RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 CBX1P83916 185 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ADAM9Q13443 819 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 TMTC1Q8IUR5 882 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ANKRD13CQ8N6S4 541 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 FAM20AQ96MK3 541 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 GLT8D2Q9H1C3 349 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 LRRN2O75325 713 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ARID5AQ03989 594 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 FSTL1Q12841 308 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 TNIP1Q15025 636 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 UGCGQ16739 394 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 HAUS3Q68CZ6 603 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 NSMFQ6X4W1 530 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 RRAGAQ7L523 313 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 CCDC65Q8IXS2 484 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 SLC5A5Q92911 643 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 PDCL3Q9H2J4 239 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 MRFAP1Q9Y605 127 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 ZHX2Q9Y6X8 837 aa11.5□□□□□ -0.57
SAMM50-206ENST00000494795 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
SAMM50-206ENST00000494795 AKAP3O75969 853 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 CCDC40Q4G0X9 1142 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 SYTL5Q8TDW5 730 aaPredicted RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 ERO1AQ96HE7 468 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 SALL4Q9UJQ4 1053 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 MRPL11Q9Y3B7 192 aaKnown RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 ASTN1O14525 1302 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 TBX3O15119 743 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 DHX15O43143 795 aaKnown RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 TLR2O60603 784 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 GCNT3O95395 438 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 TPM1P09493 284 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 ZSCAN20P17040 1043 aaPredicted RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 NR2F2P24468 414 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 SOX10P56693 466 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 MAN2A1Q16706 1144 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 UTP14CQ5TAP6 766 aaKnown RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 PRPF38AQ8NAV1 312 aaKnown RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 BAP1Q92560 729 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 FIZ1Q96SL8 496 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 HINFPQ9BQA5 517 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 LXNQ9BS40 222 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
SAMM50-206ENST00000494795 SLC38A10Q9HBR0 1119 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 COL4A3BPQ9Y5P4 624 aa11.49□□□□□ -0.57
SAMM50-206ENST00000494795 TADA3O75528 432 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 SLC9A1P19634 815 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 HSD17B4P51659 736 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 FKBP3Q00688 224 aaKnown RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 LRRC63Q05C16 580 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 ZMYM2Q9UBW7 1377 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 MACROD2A1Z1Q3 448 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 TGFB1I1O43294 461 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 DDNO94850 711 aaPredicted RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 SEC31AO94979 1220 aaKnown RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 SP4Q02446 784 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 MEA1Q16626 185 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 DAW1Q8N136 415 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 NOC3LQ8WTT2 800 aaKnown RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 ELMO3Q96BJ8 720 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 MXRA8Q9BRK3 442 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 GPRC5CQ9NQ84 441 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 PTPRAP18433 802 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 GFPT1Q06210 699 aaPredicted RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 PSMD2Q13200 908 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 FAM160B2Q86V87 743 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 MYCT1Q8N699 235 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 CCDC51Q96ER9 411 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 KIAA1683Q9H0B3 1180 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 MLXIPQ9HAP2 919 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.48□□□□□ -0.57
SAMM50-206ENST00000494795 ST7Q9NRC1 585 aa11.48□□□□□ -0.57
SAMM50-206ENST00000494795 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
SAMM50-206ENST00000494795 CTNND1O60716 968 aaKnown RBP11.47□□□□□ -0.57
SAMM50-206ENST00000494795 EYA4O95677 639 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms