RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ASB2Q96Q27 587 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 RAD9AQ99638 391 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 C17orf80Q9BSJ5 609 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 TUBE1Q9UJT0 475 aa13.32□□□□□ -0.28
VTI1A-208ENST00000494728 NAP1L2Q9ULW6 460 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-208ENST00000494728 IGLV3-22A0A075B6J6 115 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 MBLAC1A4D2B0 266 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-208ENST00000494728 SMCO2A6NFE2 343 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 FAM86B1E9PN63 330 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 EFCAB14O75071 495 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 CAND2O75155 1236 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 CCNE2O96020 404 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 FAM86B2P0C5J1 330 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 GHRP10912 638 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 METAP2P50579 478 aaKnown RBP eCLIP13.31□□□□□ -0.28
VTI1A-208ENST00000494728 RCAN1P53805 252 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 ACTR2P61160 394 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 ERVK-21P61565 698 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 IGBP1P78318 339 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-208ENST00000494728 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-208ENST00000494728 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 PHKBQ93100 1093 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 AGXT2Q9BYV1 514 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 AGO4Q9HCK5 861 aaKnown RBP13.31□□□□□ -0.28
VTI1A-208ENST00000494728 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 SLC9A2Q9UBY0 812 aa13.31□□□□□ -0.28
VTI1A-208ENST00000494728 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-208ENST00000494728 PLXNA4Q9HCM2 1894 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 DDX39AO00148 427 aaKnown RBP13.3□□□□□ -0.28
VTI1A-208ENST00000494728 GNAT1P11488 350 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 SCG2P13521 617 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 INSRRP14616 1297 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 RPS6KB1P23443 525 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
VTI1A-208ENST00000494728 LPIN1Q14693 890 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 PLCB4Q15147 1175 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 NTRK3Q16288 839 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 CEP55Q53EZ4 464 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 JAKMIP3Q5VZ66 844 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 RASGRP4Q8TDF6 673 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 DNAJB3Q8WWF6 145 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 LINC01599Q8WXQ3 324 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 SEPT8Q92599 483 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 GLG1Q92896 1179 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 TGS1Q96RS0 853 aaKnown RBP13.3□□□□□ -0.28
VTI1A-208ENST00000494728 IFIH1Q9BYX4 1025 aaKnown RBP13.3□□□□□ -0.28
VTI1A-208ENST00000494728 EHMT1Q9H9B1 1298 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
VTI1A-208ENST00000494728 NFASCO94856 1347 aa13.3□□□□□ -0.28
VTI1A-208ENST00000494728 hCG_1984214I3L0E3 225 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 MEIS1O00470 390 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 DHX15O43143 795 aaKnown RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 EDIL3O43854 480 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 UPP2O95045 317 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 AMHP03971 560 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 LINC00271P0C7V0 271 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 AP3B2Q13367 1082 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 SKIV2LQ15477 1246 aaKnown RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 RPAINQ86UA6 219 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 ZNF713Q8N859 430 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 AGO3Q9H9G7 860 aaKnown RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 RC3H2Q9HBD1 1191 aaKnown RBP13.29□□□□□ -0.28
VTI1A-208ENST00000494728 CDY2AQ9Y6F7 541 aa13.29□□□□□ -0.28
VTI1A-208ENST00000494728 MAFGO15525 162 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 ATG7O95352 703 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 FOSP01100 380 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-208ENST00000494728 BMP1P13497 986 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 FGD1P98174 961 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 TMEM62Q0P6H9 643 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 TOB2Q14106 344 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-208ENST00000494728 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 TAF2Q6P1X5 1199 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 FBXL16Q8N461 479 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
VTI1A-208ENST00000494728 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
VTI1A-208ENST00000494728 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.29
VTI1A-208ENST00000494728 ESYT2A0FGR8 921 aa13.27□□□□□ -0.29
VTI1A-208ENST00000494728 ZBTB42B2RXF5 422 aa13.27□□□□□ -0.29
VTI1A-208ENST00000494728 TNFRSF10AO00220 468 aa13.27□□□□□ -0.29
VTI1A-208ENST00000494728 MRPS6P82932 125 aaKnown RBP13.27□□□□□ -0.29
VTI1A-208ENST00000494728 LENG9Q96B70 501 aa13.27□□□□□ -0.29
VTI1A-208ENST00000494728 UHRF1Q96T88 793 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-208ENST00000494728 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
VTI1A-208ENST00000494728 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
VTI1A-208ENST00000494728 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
VTI1A-208ENST00000494728 ATP4AP20648 1035 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms