RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 GRIK4Q16099 956 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 ABHD15Q6UXT9 468 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 RUFY4Q6ZNE9 571 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 RPAINQ86UA6 219 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 IGKV6D-21A0A0A0MT36 114 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 MBLAC1A4D2B0 266 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-216ENST00000494613 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
LIMS2-216ENST00000494613 IPO5O00410 1097 aaKnown RBP17.74■□□□□ 0.43
LIMS2-216ENST00000494613 TLL1O43897 1013 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 EFCAB14O75071 495 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 CCNE2O96020 404 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 CTSHP09668 335 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 IGFBP4P22692 258 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 CIITAP33076 1130 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 ANAPC15P60006 121 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 IGBP1P78318 339 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 CPLX2Q6PUV4 134 aaKnown RBP17.74■□□□□ 0.43
LIMS2-216ENST00000494613 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
LIMS2-216ENST00000494613 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 TNPO1Q92973 898 aaKnown RBP17.74■□□□□ 0.43
LIMS2-216ENST00000494613 ZNF577Q9BSK1 485 aa17.74■□□□□ 0.43
LIMS2-216ENST00000494613 MYO9BQ13459 2157 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 RFXAPO00287 272 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 ARHGEF15O94989 841 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 DEXIO95424 95 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 USP11P51784 963 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 TAP1Q03518 808 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 PRR16Q569H4 304 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 TAF2Q6P1X5 1199 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.73■□□□□ 0.43
LIMS2-216ENST00000494613 DNAJB3Q8WWF6 145 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 SEPT8Q92599 483 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 ZBTB10Q96DT7 871 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 RAD9AQ99638 391 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 SLKQ9H2G2 1235 aaPredicted RBP17.73■□□□□ 0.43
LIMS2-216ENST00000494613 CERS4Q9HA82 394 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 TBC1D22BQ9NU19 505 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 TUBE1Q9UJT0 475 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 TPCN1Q9ULQ1 816 aa17.73■□□□□ 0.43
LIMS2-216ENST00000494613 POTEB3A0JP26 581 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 DLL1O00548 723 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 SEC24BO95487 1268 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 SCRN1Q12765 414 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
LIMS2-216ENST00000494613 POTEBQ6S5H4 581 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 RSPH3Q86UC2 560 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 PPM1EQ8WY54 764 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 AIFM3Q96NN9 605 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 PCDHA4Q9UN74 947 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 TRPC6Q9Y210 931 aa17.72■□□□□ 0.43
LIMS2-216ENST00000494613 KAT6AQ92794 2004 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 BACH1O14867 736 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 PFKFB2O60825 505 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 DTNBO60941 627 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 GJB5O95377 273 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 SLC26A2P50443 739 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 FAM117BQ6P1L5 589 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 BLIDQ8IZY5 108 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 TRAPPC12Q8WVT3 735 aa17.71■□□□□ 0.43
LIMS2-216ENST00000494613 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 LCHNA4D1U4 455 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 M0R2N6 131 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 ATP4AP20648 1035 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 KLRC1P26715 233 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 AK2P54819 239 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 MGAT3Q09327 533 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 ANKRD1Q15327 319 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 CCDC85BQ15834 202 aaPredicted RBP17.7■□□□□ 0.42
LIMS2-216ENST00000494613 FAM160B1Q5W0V3 765 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 ZNF746Q6NUN9 644 aaPredicted RBP17.7■□□□□ 0.42
LIMS2-216ENST00000494613 MIS18BP1Q6P0N0 1132 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 PDXDC2PQ6P474 469 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 USP38Q8NB14 1042 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 TBCKQ8TEA7 893 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 LENG9Q96B70 501 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 ZNF302Q9NR11 478 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 PCDHA2Q9Y5H9 948 aa17.7■□□□□ 0.42
LIMS2-216ENST00000494613 GBF1Q92538 1859 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 TANC1Q9C0D5 1861 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-216ENST00000494613 EPOPA6NHQ4 379 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 HBP1O60381 514 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
LIMS2-216ENST00000494613 AMHP03971 560 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 SETQ01105 290 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-216ENST00000494613 NPY5RQ15761 445 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 GALNT17Q6IS24 598 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 MTHFD1LQ6UB35 978 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 SPRED2Q7Z698 418 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-216ENST00000494613 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-216ENST00000494613 ARNTL2Q8WYA1 636 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 APBB2Q92870 758 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
LIMS2-216ENST00000494613 IFIH1Q9BYX4 1025 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms