RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 ABHD14A-ACY1A0A1B0GW23 586 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 POTEB3A0JP26 581 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 RRN3P2A6NIE6 340 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.1
RBM39-239ENST00000494274 LGR5O75473 907 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 ATG7O95352 703 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 CXCL10P02778 98 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 FOSL2P15408 326 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 HOXC8P31273 242 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 HOXD11P31277 338 aaPredicted RBP8.21□□□□□ -1.1
RBM39-239ENST00000494274 CIITAP33076 1130 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 USP11P51784 963 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 ADAM17P78536 824 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 MBTPS1Q14703 1052 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 PLCB4Q15147 1175 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 ME3Q16798 604 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 TCTN1Q2MV58 587 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 FAM160B1Q5W0V3 765 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 MIS18BP1Q6P0N0 1132 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 FAM117BQ6P1L5 589 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 CNKSR3Q6P9H4 555 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 POTEBQ6S5H4 581 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 ABHD15Q6UXT9 468 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 RUFY4Q6ZNE9 571 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 PLPPR4Q7Z2D5 763 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 RSPH3Q86UC2 560 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 HERC6Q8IVU3 1022 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 PHOSPHO2Q8TCD6 241 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 TRAPPC12Q8WVT3 735 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 DNAJB3Q8WWF6 145 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 PPM1EQ8WY54 764 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 GJA10Q969M2 543 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 C22orf23Q9BZE7 217 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 OSBPL7Q9BZF2 842 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 PRDM12Q9H4Q4 367 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 CERS4Q9HA82 394 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 ZNF302Q9NR11 478 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 GJB4Q9NTQ9 266 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.1
RBM39-239ENST00000494274 TUBE1Q9UJT0 475 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 PCDHA11Q9Y5I1 949 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 LCTP09848 1927 aa8.21□□□□□ -1.1
RBM39-239ENST00000494274 CCDC194A0A1B0GVG4 234 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 MSH4O15457 936 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 CHMP2AO43633 222 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 TLL1O43897 1013 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 BAIAP3O94812 1187 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 LARGE1O95461 756 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 CTDNEP1O95476 244 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 CA3P07451 260 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 PSAPP07602 524 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 IGFBP4P22692 258 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 FOSBP53539 338 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 WDR5P61964 334 aaKnown RBP8.2□□□□□ -1.1
RBM39-239ENST00000494274 DEFB103AP81534 67 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
RBM39-239ENST00000494274 TMEM62Q0P6H9 643 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 NONOQ15233 471 aaKnown RBP eCLIP8.2□□□□□ -1.1
RBM39-239ENST00000494274 INF2Q27J81 1249 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 MARCH8Q5T0T0 291 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 GALNT17Q6IS24 598 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 TAF2Q6P1X5 1199 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 CCDC60Q8IWA6 550 aaPredicted RBP8.2□□□□□ -1.1
RBM39-239ENST00000494274 WASF1Q92558 559 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 SEPT8Q92599 483 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 SLC9A7Q96T83 725 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 GAS2L1Q99501 681 aaPredicted RBP8.2□□□□□ -1.1
RBM39-239ENST00000494274 PCDHA10Q9Y5I2 948 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 EMSYQ7Z589 1322 aa8.2□□□□□ -1.1
RBM39-239ENST00000494274 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 IGKV6D-21A0A0A0MT36 114 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 EDIL3O43854 480 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 MARCH6O60337 910 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 HBP1O60381 514 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 JAK2O60674 1132 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 GAS7O60861 476 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 EFCAB14O75071 495 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 CAND2O75155 1236 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 UPP2O95045 317 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 TDP2O95551 362 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 CHRNA1P02708 482 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 GHRP10912 638 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 FDPSP14324 419 aaKnown RBP8.19□□□□□ -1.1
RBM39-239ENST00000494274 KLRC1P26715 233 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 SLC26A2P50443 739 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 KRT76Q01546 638 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
RBM39-239ENST00000494274 LETM2Q2VYF4 491 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 ZNF746Q6NUN9 644 aaPredicted RBP8.19□□□□□ -1.1
RBM39-239ENST00000494274 MTHFD1LQ6UB35 978 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.19□□□□□ -1.1
RBM39-239ENST00000494274 PIK3AP1Q6ZUJ8 805 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 MYOCDQ8IZQ8 938 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 DAGLBQ8NCG7 672 aa8.19□□□□□ -1.1
RBM39-239ENST00000494274 MAFAQ8NHW3 353 aaPredicted RBP8.19□□□□□ -1.1
RBM39-239ENST00000494274 OXER1Q8TDS5 423 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms