RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.4■■□□□ 1.66
CDKN2A-206ENST00000494262 ARNTL2Q8WYA1 636 aa25.4■■□□□ 1.66
CDKN2A-206ENST00000494262 OSBPL7Q9BZF2 842 aa25.4■■□□□ 1.66
CDKN2A-206ENST00000494262 UPF3BQ9BZI7 483 aaKnown RBP25.4■■□□□ 1.66
CDKN2A-206ENST00000494262 TM6SF1Q9BZW5 370 aa25.4■■□□□ 1.66
CDKN2A-206ENST00000494262 TUBE1Q9UJT0 475 aa25.4■■□□□ 1.66
CDKN2A-206ENST00000494262 LCHNA4D1U4 455 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 FAM86B1E9PN63 330 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 DDX39AO00148 427 aaKnown RBP25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 GJB5O95377 273 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 FAM86B2P0C5J1 330 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 FAM26DQ5JW98 314 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 TAF2Q6P1X5 1199 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 PLA2G4DQ86XP0 818 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 RAD9AQ99638 391 aa25.39■■□□□ 1.66
CDKN2A-206ENST00000494262 EPOPA6NHQ4 379 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 AMHP03971 560 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 CYP3A4P08684 503 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 ERICH6BQ5W0A0 696 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 RSPH3Q86UC2 560 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 MICALL1Q8N3F8 863 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 CCDC148Q8NFR7 591 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 BICD2Q8TD16 824 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 CRYGNQ8WXF5 182 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 LARP6Q9BRS8 491 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 COL25A1Q9BXS0 654 aaPredicted RBP25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 PRDM6Q9NQX0 595 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 VPS54Q9P1Q0 977 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 TRPC6Q9Y210 931 aa25.38■■□□□ 1.65
CDKN2A-206ENST00000494262 MBLAC1A4D2B0 266 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 INSRRP14616 1297 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 STAT5BP51692 787 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 MKRN4PQ13434 485 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 MARCH8Q5T0T0 291 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 RPAINQ86UA6 219 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 MYOCDQ8IZQ8 938 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 RASGRP4Q8TDF6 673 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 UIMC1Q96RL1 719 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 SPTBN5Q9NRC6 3674 aaKnown RBP25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 MICAL3Q7RTP6 2002 aa25.37■■□□□ 1.65
CDKN2A-206ENST00000494262 IGLV3-22A0A075B6J6 115 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 RRN3P2A6NIE6 340 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 CCNE2O96020 404 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 CHRNA1P02708 482 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 PLCB4Q15147 1175 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 PLPPR4Q7Z2D5 763 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 SPRED2Q7Z698 418 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 TRIM22Q8IYM9 498 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 TNPO1Q92973 898 aaKnown RBP25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 ZBTB10Q96DT7 871 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 ZNF274Q96GC6 653 aaPredicted RBP25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 PDRG1Q9NUG6 133 aa25.36■■□□□ 1.65
CDKN2A-206ENST00000494262 ATG7O95352 703 aa25.35■■□□□ 1.65
CDKN2A-206ENST00000494262 SSRP1Q08945 709 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-206ENST00000494262 STK3Q13188 491 aa25.35■■□□□ 1.65
CDKN2A-206ENST00000494262 DNAJB3Q8WWF6 145 aa25.35■■□□□ 1.65
CDKN2A-206ENST00000494262 ZNF577Q9BSK1 485 aa25.35■■□□□ 1.65
CDKN2A-206ENST00000494262 IFIH1Q9BYX4 1025 aaKnown RBP25.35■■□□□ 1.65
CDKN2A-206ENST00000494262 IPO5O00410 1097 aaKnown RBP25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 CPLX1O14810 134 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 BACH1O14867 736 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 GTPBP6O43824 516 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 GHRP10912 638 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 SETQ01105 290 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 MGAT3Q09327 533 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 ABHD15Q6UXT9 468 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 APBB2Q92870 758 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 FAM49AQ9H0Q0 323 aaPredicted RBP25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 SH3GLB2Q9NR46 395 aa25.34■■□□□ 1.65
CDKN2A-206ENST00000494262 POTEB3A0JP26 581 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 DHX15O43143 795 aaKnown RBP25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 NLRP5P59047 1200 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 PRR16Q569H4 304 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 FAM160B1Q5W0V3 765 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 POTEBQ6S5H4 581 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 TRAPPC12Q8WVT3 735 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 INSL6Q9Y581 213 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 MTCH2Q9Y6C9 303 aa25.33■■□□□ 1.65
CDKN2A-206ENST00000494262 XIRP2A4UGR9 3374 aa25.33■■□□□ 1.64
CDKN2A-206ENST00000494262 IGKV6D-21A0A0A0MT36 114 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 LINC01553A4QN01 128 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 SLC26A2P50443 739 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 MIS18BP1Q6P0N0 1132 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 TBC1D22BQ9NU19 505 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 MTUS1Q9ULD2 1270 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 CDY2AQ9Y6F7 541 aa25.32■■□□□ 1.64
CDKN2A-206ENST00000494262 PRRC2BQ5JSZ5 2229 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 POU3F3P20264 500 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 CIITAP33076 1130 aa25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 MRPS6P82932 125 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 GRB10Q13322 594 aa25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 LPIN1Q14693 890 aa25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 KRT40Q6A162 431 aa25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 CPLX2Q6PUV4 134 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 CCDC60Q8IWA6 550 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 TGS1Q96RS0 853 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 ZNF302Q9NR11 478 aa25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 THEGQ9P2T0 379 aa25.31■■□□□ 1.64
CDKN2A-206ENST00000494262 PCDHA2Q9Y5H9 948 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms