RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PDLIM7Q9NR12 457 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 OVOS2A0A0G2JMS6 1433 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 COL5A3P25940 1745 aaPredicted RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 RRP9O43818 475 aaKnown RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 THBDP07204 575 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 ATF2P15336 505 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 GRIA2P42262 883 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 SEPHS1P49903 392 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 AFF3P51826 1226 aaKnown RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 RIPK4P57078 832 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 COL9A2Q14055 689 aaPredicted RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 COL24A1Q17RW2 1714 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 INF2Q27J81 1249 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 EEF1DP3Q658K8 133 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 LILRA6Q6PI73 481 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 SMC5Q8IY18 1101 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 BTN2A2Q8WVV5 523 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 PWWP2AQ96N64 755 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZNF408Q9H9D4 720 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 CAPN10Q9HC96 672 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 AKAP11Q9UKA4 1901 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 RPAP1Q9BWH6 1393 aaPredicted RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 STRCP1A6NGW2 1772 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 PLS3P13797 630 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 TCF3P15923 654 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 IGFBP6P24592 240 aaPredicted RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 FPR2P25090 351 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 AMPD2Q01433 879 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 HLA-DQA1Q5Y7H0 255 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZC3H14Q6PJT7 736 aaKnown RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 CYP2R1Q6VVX0 501 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 TTLL10Q6ZVT0 673 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 KCNC2Q96PR1 638 aa3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 TMEFF2Q9UIK5 374 aaPredicted RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 SF3B6Q9Y3B4 125 aaKnown RBP3.26□□□□□ -1.89
CDC42EP3-205ENST00000494083 ARHGAP23Q9P227 1491 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 A0A1W2PQJ5 194 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 C7orf72A4D263 438 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 F8W031 263 aaPredicted RBP3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 PPM1BO75688 479 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 GLI4P10075 376 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 CASP7P55210 303 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 TCERG1LQ5VWI1 586 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 CELF2-AS1Q8N7Q2 184 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 DPF3Q92784 378 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 CEMIPQ8WUJ3 1361 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 OTOL1A6NHN0 477 aaPredicted RBP3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 HOXA5P20719 270 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 HDAC1Q13547 482 aaPredicted RBP3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 RCSD1Q6JBY9 416 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 AMIGO3Q86WK7 504 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 COPS5Q92905 334 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 UBXN6Q9BZV1 441 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 GBP3Q9H0R5 595 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 AKT3Q9Y243 479 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 OVOS2A0A0J9YW53 1432 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 OVOS2Q6IE36 1432 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 A2ML1A8K2U0 1454 aa3.25□□□□□ -1.89
CDC42EP3-205ENST00000494083 TAF1LQ8IZX4 1826 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 NPHP3-ACAD11A0A0J9YXS1 232 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 NTRK1P04629 796 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 CYBBP04839 570 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 FGRP09769 529 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 PMLP29590 882 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 DNAJA1P31689 397 aaKnown RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 CNKSR3Q6P9H4 555 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZNF526Q8TF50 670 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 FBXO41Q8TF61 875 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 FRAT1Q92837 279 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 SEC16BQ96JE7 1060 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 TINF2Q9BSI4 451 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 MARCH2Q9P0N8 246 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 IL16Q14005 1332 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 MSH6P52701 1360 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 FFAR3O14843 346 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 PPM1GO15355 546 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 TBC1D8O95759 1140 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 FAM177A1Q8N128 213 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 MARCH10Q8NA82 808 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 SPATA32Q96LK8 384 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 ZCCHC4Q9H5U6 513 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 EMC9Q9Y3B6 208 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 ANKRD34BA5PLL1 514 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 HRKO00198 91 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 MAPKAPK2P49137 400 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 GTF2IRD2BQ6EKJ0 949 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 DENND5AQ6IQ26 1287 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 PAQR3Q6TCH7 311 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 GTF2IRD2Q86UP8 949 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 NLRP10Q86W26 655 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 SIAH1Q8IUQ4 282 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 TP53I13Q8NBR0 393 aaPredicted RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 BVESQ8NE79 360 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 YTHDC1Q96MU7 727 aaKnown RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 XYLT2Q9H1B5 865 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 PARD6AQ9NPB6 346 aa3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 DIS3Q9Y2L1 958 aaKnown RBP3.24□□□□□ -1.89
CDC42EP3-205ENST00000494083 SLC12A7Q9Y666 1083 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms