RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GIT2Q14161 759 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 SCFD1Q8WVM8 642 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 TEPSINQ96N21 525 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 SIK3Q9Y2K2 1263 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 INPP5BP32019 993 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 ARHGAP25P42331 645 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 PTGER2P43116 358 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 TNFAIP1Q13829 316 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 ZNHIT6Q9NWK9 470 aaKnown RBP15.2■□□□□ 0.02
VCP-207ENST00000493886 HDAC6Q9UBN7 1215 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 REXO2Q9Y3B8 237 aaKnown RBP15.2■□□□□ 0.02
VCP-207ENST00000493886 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 ATAD5Q96QE3 1844 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 ERCC3P19447 782 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 LRCH2Q5VUJ6 765 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 OTOP1Q7RTM1 612 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 CEP120Q8N960 986 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 NOA1Q8NC60 698 aaKnown RBP15.2■□□□□ 0.02
VCP-207ENST00000493886 NAPGQ99747 312 aaPredicted RBP15.2■□□□□ 0.02
VCP-207ENST00000493886 EFCC1Q9HA90 598 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 PDE11AQ9HCR9 933 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 RGL1Q9NZL6 768 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
VCP-207ENST00000493886 PSMD10O75832 226 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
VCP-207ENST00000493886 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
VCP-207ENST00000493886 SLC30A10Q6XR72 485 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 CEP63Q96MT8 703 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 REEP2Q9BRK0 252 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 KCTD10Q9H3F6 313 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
VCP-207ENST00000493886 N4BP1O75113 896 aaKnown RBP15.19■□□□□ 0.02
VCP-207ENST00000493886 CCDC172P0C7W6 258 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 VSNL1P62760 191 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 CCDC40Q4G0X9 1142 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 SLC5A5Q92911 643 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 AGBL1Q96MI9 1066 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 ABCB6Q9NP58 842 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 FEZ2Q9UHY8 353 aaPredicted RBP15.19■□□□□ 0.02
VCP-207ENST00000493886 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
VCP-207ENST00000493886 CCDC151A5D8V7 595 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 PHACTR2O75167 634 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 EYA4O95677 639 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 ICAM1P05362 532 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 CEP112Q8N8E3 955 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 HSD17B14Q9BPX1 270 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 WDR46O15213 610 aaKnown RBP15.18■□□□□ 0.02
VCP-207ENST00000493886 SRGAP2O75044 1071 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 PPP2R5CQ13362 524 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 SFR1Q86XK3 245 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 KCTD17Q8N5Z5 321 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 CAPZA3Q96KX2 299 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 MTFR1LQ9H019 292 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 FAM207AQ9NSI2 230 aaPredicted RBP15.18■□□□□ 0.02
VCP-207ENST00000493886 ZNF536O15090 1300 aa15.18■□□□□ 0.02
VCP-207ENST00000493886 EPHB6O15197 1021 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CHMP2AO43633 222 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CYLC1P35663 651 aaPredicted RBP15.17■□□□□ 0.02
VCP-207ENST00000493886 LMAN1P49257 510 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CASP5P51878 434 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CTTNQ14247 550 aaKnown RBP15.17■□□□□ 0.02
VCP-207ENST00000493886 PRPF38AQ8NAV1 312 aaKnown RBP15.17■□□□□ 0.02
VCP-207ENST00000493886 LPAR1Q92633 364 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 NHEJ1Q9H9Q4 299 aaPredicted RBP15.17■□□□□ 0.02
VCP-207ENST00000493886 TUFT1Q9NNX1 390 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CTAGE15A4D2H0 777 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 GAS7O60861 476 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 GNA14O95837 355 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CTAGE8P0CG41 777 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 HERVK_113P62684 666 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CDK17Q00537 523 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CTAGE6Q86UF2 777 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CTAGE4Q8IX94 777 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 MICALL2Q8IY33 904 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 CCDC170Q8IYT3 715 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 DYDC2Q96IM9 177 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 HINFPQ9BQA5 517 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 UBXN6Q9BZV1 441 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 VPS18Q9P253 973 aa15.17■□□□□ 0.02
VCP-207ENST00000493886 SLITRK3O94933 977 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 GMPSP49915 693 aaPredicted RBP15.16■□□□□ 0.02
VCP-207ENST00000493886 HSD17B4P51659 736 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 PRELPP51888 382 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 KRT83P78385 493 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 EDRF1Q3B7T1 1238 aa15.16■□□□□ 0.02
VCP-207ENST00000493886 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms