RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 A0A0U1RQG5 324 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-208ENST00000493815 HAS3O00219 553 aa20.11■□□□□ 0.81
PDLIM7-208ENST00000493815 MARCKSP29966 332 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-208ENST00000493815 PDXDC2PQ6P474 469 aa20.11■□□□□ 0.81
PDLIM7-208ENST00000493815 ERAP1Q9NZ08 941 aa20.11■□□□□ 0.81
PDLIM7-208ENST00000493815 VWA3AA6NCI4 1184 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 LAD1O00515 517 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 ATP4AP20648 1035 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 CDC25AP30304 524 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 NUCB2P80303 420 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 CYP4A11Q02928 519 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 GRIN1Q05586 938 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 TRIM60Q495X7 471 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 ZNF396Q96N95 335 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 KATNAL1Q9BW62 490 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 PCDH10Q9P2E7 1040 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 ATP11BQ9Y2G3 1177 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 PP2D1A8MPX8 630 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 ARVCFO00192 962 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 ZNF862O60290 1169 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 PQBP1O60828 265 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 PRPHP41219 470 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 FXR2P51116 673 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 TMEM266Q2M3C6 531 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 FAM160B1Q5W0V3 765 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 PLPPR4Q7Z2D5 763 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 CKAP2LQ8IYA6 745 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 C7orf31Q8N865 590 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 RDM1Q8NG50 284 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 AFAP1L1Q8TED9 768 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 DYDC2Q96IM9 177 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 WRAP73Q9P2S5 460 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 HDAC6Q9UBN7 1215 aa20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 MAFBQ9Y5Q3 323 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-208ENST00000493815 SCN10AQ9Y5Y9 1956 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 SMIM10L2AP0DMW4 78 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 SMIM10L2BP0DMW5 78 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 RTP1P59025 263 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 CTTNQ14247 550 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 HIC1Q14526 733 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 PLCB4Q15147 1175 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 EPHA7Q15375 998 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 SLC43A3Q8NBI5 491 aa20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 EIF2AK1Q9BQI3 630 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-208ENST00000493815 IGSF9BQ9UPX0 1349 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 BMP15O95972 392 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 NASPP49321 788 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 CDK7P50613 346 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 SNX17Q15036 470 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 SLC39A14Q15043 492 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 LINC00301Q8NCQ3 95 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 TRPV6Q9H1D0 765 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 TRMT13Q9NUP7 481 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 SETD4Q9NVD3 440 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 LRWD1Q9UFC0 647 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 TRPC6Q9Y210 931 aa20.08■□□□□ 0.81
PDLIM7-208ENST00000493815 A0A087WWV3 80 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 TMEM150BA6NC51 233 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 SLITRK3O94933 977 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 PRKCEQ02156 737 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 TLE2Q04725 743 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 STK38Q15208 465 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 GDF6Q6KF10 455 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 NFRKBQ6P4R8 1299 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 TPH2Q8IWU9 490 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 IGSF22Q8N9C0 903 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 ZBTB10Q96DT7 871 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 CLIC6Q96NY7 704 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 LXNQ9BS40 222 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 P4HBP07237 508 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 QARSP47897 775 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 IGBP1P78318 339 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 HSD17B14Q9BPX1 270 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
PDLIM7-208ENST00000493815 MYH15Q9Y2K3 1946 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 ZBTB39O15060 712 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 B4GALT4O60513 344 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 MED24O75448 989 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 PSMC5P62195 406 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 PDIA5Q14554 519 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 SPECC1Q5M775 1068 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 ATP8B4Q8TF62 1192 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 ATP6V0A1Q93050 837 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 GTF2IRD1Q9UHL9 959 aa20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 FBXO2Q9UK22 296 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-208ENST00000493815 SPTLC2O15270 562 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 SPATA31C1P0DKV0 1188 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 INSRRP14616 1297 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 SLC26A2P50443 739 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 PPFIA1Q13136 1202 aa20.05■□□□□ 0.8
PDLIM7-208ENST00000493815 C1orf53Q5VUE5 145 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms