RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 DAAM2Q86T65 1068 aa14.38□□□□□ -0.11
PTK7-218ENST00000493339 CABLES1Q8TDN4 633 aa14.38□□□□□ -0.11
PTK7-218ENST00000493339 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.38□□□□□ -0.111e-8■□□□□ 9.6
PTK7-218ENST00000493339 CEP72Q9P209 647 aa14.38□□□□□ -0.11
PTK7-218ENST00000493339 UTP11Q9Y3A2 253 aaKnown RBP14.38□□□□□ -0.11
PTK7-218ENST00000493339 SRCAPQ6ZRS2 3230 aa14.38□□□□□ -0.11
PTK7-218ENST00000493339 SNUPNO95149 360 aaKnown RBP14.37□□□□□ -0.11
PTK7-218ENST00000493339 RARAP10276 462 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 COPB2P35606 906 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 ABL2P42684 1182 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 AMPD3Q01432 767 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 HOOK3Q86VS8 718 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 MGARPQ8TDB4 240 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 CORO1CQ9ULV4 474 aaPredicted RBP14.37□□□□□ -0.11
PTK7-218ENST00000493339 TRIM33Q9UPN9 1127 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 AFF2P51816 1311 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 CCND1P24385 295 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 HEATR3Q7Z4Q2 680 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 ACTRT1Q8TDG2 376 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 PBKQ96KB5 322 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 TIAM2Q8IVF5 1701 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 CCNT1O60563 726 aaKnown RBP14.37□□□□□ -0.11
PTK7-218ENST00000493339 FGFR1OPO95684 399 aaKnown RBP14.37□□□□□ -0.11
PTK7-218ENST00000493339 LINGO3P0C6S8 592 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 FGFR2P21802 821 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 PPP1R2P41236 205 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 PRPF4BQ13523 1007 aaKnown RBP14.37□□□□□ -0.11
PTK7-218ENST00000493339 SLMAPQ14BN4 828 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 LRRC14Q15048 493 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 TAF11Q15544 211 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 CCDC38Q502W7 563 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 OSBPL1AQ9BXW6 950 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 ADAM7Q9H2U9 754 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 KCNMB3Q9NPA1 279 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 PCDHA6Q9UN73 950 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 PCDHA8Q9Y5H6 950 aa14.37□□□□□ -0.11
PTK7-218ENST00000493339 PHRF1Q9P1Y6 1649 aaKnown RBP14.37□□□□□ -0.11
PTK7-218ENST00000493339 RGPD5Q99666 1765 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 USP17L12C9JPN9 530 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 USP17L21D6R901 530 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 TRAF5O00463 557 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
PTK7-218ENST00000493339 RGS16O15492 202 aaPredicted RBP14.36□□□□□ -0.11
PTK7-218ENST00000493339 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
PTK7-218ENST00000493339 RWDD2BP57060 319 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 TRIM28Q13263 835 aaKnown RBP14.36□□□□□ -0.11
PTK7-218ENST00000493339 BLMHQ13867 455 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 LRRC55Q6ZSA7 311 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 PEX26Q7Z412 305 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 DZIP3Q86Y13 1208 aaKnown RBP14.36□□□□□ -0.11
PTK7-218ENST00000493339 CUEDC2Q9H467 287 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 HOMER3Q9NSC5 361 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 MYMKA6NI61 221 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 ASIC2Q16515 512 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 NLRP10Q86W26 655 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 DYDC1Q8WWB3 177 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 PNMA3Q9UL41 463 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 NR2E1Q9Y466 385 aa14.36□□□□□ -0.11
PTK7-218ENST00000493339 OR52Z1P0C646 297 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
PTK7-218ENST00000493339 MMP13P45452 471 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 PLTPP55058 493 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 EIF3BP55884 814 aaKnown RBP14.35□□□□□ -0.11
PTK7-218ENST00000493339 UBAP2Q5T6F2 1119 aaKnown RBP14.35□□□□□ -0.11
PTK7-218ENST00000493339 SV2BQ7L1I2 683 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 PLCD4Q9BRC7 762 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 CTCFP49711 727 aaPredicted RBP14.35□□□□□ -0.11
PTK7-218ENST00000493339 PTK2Q05397 1052 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 ZMYND12Q9H0C1 365 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 MAGEF1Q9HAY2 307 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 MLXIPLQ9NP71 852 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 ZFATQ9P243 1243 aa14.35□□□□□ -0.11
PTK7-218ENST00000493339 CCDC188H7C350 402 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 FGGP02679 453 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 ALADP13716 330 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 SEMA3FQ13275 785 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 CALML4Q96GE6 196 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 TSG101Q99816 390 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 NSRP1Q9H0G5 558 aaKnown RBP14.34□□□□□ -0.11
PTK7-218ENST00000493339 NUCKS1Q9H1E3 243 aaKnown RBP14.34□□□□□ -0.11
PTK7-218ENST00000493339 FGFR1OP2Q9NVK5 253 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 TBC1D7Q9P0N9 293 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 NUP188Q5SRE5 1749 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 SNX3O60493 162 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 TXKP42681 527 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 MSH2P43246 934 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 ATP11AP98196 1134 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 SLC29A2Q14542 456 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 TMED8Q6PL24 325 aaPredicted RBP14.34□□□□□ -0.11
PTK7-218ENST00000493339 SLC30A9Q6PML9 568 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 CNKSR1Q969H4 720 aa14.34□□□□□ -0.11
PTK7-218ENST00000493339 ADAM22Q9P0K1 906 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms