RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CTCFLQ8NI51 663 aaPredicted RBP12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 EDAQ92838 391 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 MTA3Q9BTC8 594 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 OSBPL7Q9BZF2 842 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 PLAGL2Q9UPG8 496 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 MEIS2O14770 477 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 TBX10O75333 385 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 DDAH1O94760 285 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 NDUFV1P49821 464 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 GNAQP50148 359 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 COASYQ13057 564 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 TEX2Q8IWB9 1127 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 EFHBQ8N7U6 833 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 GLG1Q92896 1179 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 MSLNLQ96KJ4 702 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 MUTYHQ9UIF7 546 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 CDY2AQ9Y6F7 541 aa12.64□□□□□ -0.39
SNRNP200-207ENST00000493271 TTC3P53804 2025 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 CYP21A2P08686 494 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 KCNA2P16389 499 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 PTPN5P54829 565 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 MRPS6P82932 125 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 SP4Q02446 784 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 UBE3AQ05086 875 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 RUFY4Q6ZNE9 571 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 SMRP1Q8NCR6 262 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
SNRNP200-207ENST00000493271 KAT6AQ92794 2004 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 ZNF318Q5VUA4 2279 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 GSTTP1A0A1W2PQM5 241 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 MTMR1Q13613 665 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 CAMK1Q14012 370 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 CLUL1Q15846 466 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 ODR4Q5SWX8 454 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 NME8Q8N427 588 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 SPPL3Q8TCT6 385 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 IRF2BPLQ9H1B7 796 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 IGFLR1Q9H665 355 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 AZI2Q9H6S1 392 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 TRPV2Q9Y5S1 764 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 MRPL42Q9Y6G3 142 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 KDM3AQ9Y4C1 1321 aa12.62□□□□□ -0.39
SNRNP200-207ENST00000493271 SPDYE3A6NKU9 549 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 LOC730098B7Z3J9 87 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 E7EWF7 191 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 ATP9AO75110 1047 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 ITGB1P05556 798 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 SRGAP2BP0DMP2 458 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 CALM1P0DP23 149 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 CALM2P0DP24 149 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 CALM3P0DP25 149 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 SCG2P13521 617 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 ITGB5P18084 799 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 MARK3P27448 753 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 CD52P31358 61 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 SLC26A2P50443 739 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 PAK2Q13177 524 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 PDE12Q6L8Q7 609 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 PSTPIP2Q9H939 334 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 JPH1Q9HDC5 661 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 UBIAD1Q9Y5Z9 338 aa12.61□□□□□ -0.39
SNRNP200-207ENST00000493271 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 TRIOO75962 3097 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 LINC01565O15544 149 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 INSRRP14616 1297 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 ATF7P17544 494 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 PLPPR4Q7Z2D5 763 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 KLHL23Q8NBE8 558 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 POF1BQ8WVV4 589 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 PBXIP1Q96AQ6 731 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 PHF7Q9BWX1 381 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 CELF4Q9BZC1 486 aaKnown RBP12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 IL25Q9H293 177 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 SENP2Q9HC62 589 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 JADE2Q9NQC1 790 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 CLEC1BQ9P126 229 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 SLC9A2Q9UBY0 812 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 LRFN2Q9ULH4 789 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 PADI3Q9ULW8 664 aa12.6□□□□□ -0.39
SNRNP200-207ENST00000493271 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms