RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PLEKHG4Q58EX7 1191 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 CKAP2LQ8IYA6 745 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 MYOCDQ8IZQ8 938 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 PHKBQ93100 1093 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 SAMD11Q96NU1 681 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 NAP1L4Q99733 375 aaKnown RBP15.43■□□□□ 0.06
IRF1-210ENST00000493208 IFIH1Q9BYX4 1025 aaKnown RBP15.43■□□□□ 0.06
IRF1-210ENST00000493208 SLKQ9H2G2 1235 aaPredicted RBP15.43■□□□□ 0.06
IRF1-210ENST00000493208 MYH7BA7E2Y1 1941 aa15.43■□□□□ 0.06
IRF1-210ENST00000493208 GSTTP1A0A1W2PQM5 241 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 HBP1O60381 514 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 PSAPP07602 524 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
IRF1-210ENST00000493208 FAM26DQ5JW98 314 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 TYW1BQ6NUM6 668 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 ZNF746Q6NUN9 644 aaPredicted RBP15.42■□□□□ 0.06
IRF1-210ENST00000493208 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 DBF4BQ8NFT6 615 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 PGBD1Q96JS3 809 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 FAM167AQ96KS9 214 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 FTHL17Q9BXU8 183 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 ZNF302Q9NR11 478 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 SAMM50Q9Y512 469 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 SQORQ9Y6N5 450 aa15.42■□□□□ 0.06
IRF1-210ENST00000493208 COL1A2P08123 1366 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 MBLAC1A4D2B0 266 aaPredicted RBP15.41■□□□□ 0.06
IRF1-210ENST00000493208 IGBP1P78318 339 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 PDXDC2PQ6P474 469 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 ATXN2LQ8WWM7 1075 aaKnown RBP15.41■□□□□ 0.06
IRF1-210ENST00000493208 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
IRF1-210ENST00000493208 YME1L1Q96TA2 773 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 BRMS1Q9HCU9 246 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 TMEM260Q9NX78 707 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 LMCD1Q9NZU5 365 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 THEGQ9P2T0 379 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 PCDHA4Q9UN74 947 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 RWDD3Q9Y3V2 267 aa15.41■□□□□ 0.06
IRF1-210ENST00000493208 WDR64B1ANS9 1081 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 ARP10275 920 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 INSRRP14616 1297 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 TMOD1P28289 359 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 SFNP31947 248 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 CIITAP33076 1130 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 ADAM17P78536 824 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 SKIV2LQ15477 1246 aaKnown RBP15.4■□□□□ 0.06
IRF1-210ENST00000493208 PRR16Q569H4 304 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 ZNF484Q5JVG2 852 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 VWCEQ96DN2 955 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 UPF3BQ9BZI7 483 aaKnown RBP15.4■□□□□ 0.06
IRF1-210ENST00000493208 BCAS3Q9H6U6 928 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 PCDHA2Q9Y5H9 948 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 PCDHA10Q9Y5I2 948 aa15.4■□□□□ 0.06
IRF1-210ENST00000493208 DDX39AO00148 427 aaKnown RBP15.39■□□□□ 0.05
IRF1-210ENST00000493208 ATG7O95352 703 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 MYOGP15173 224 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 POU3F3P20264 500 aaPredicted RBP15.39■□□□□ 0.05
IRF1-210ENST00000493208 JAK3P52333 1124 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 MRPS6P82932 125 aaKnown RBP15.39■□□□□ 0.05
IRF1-210ENST00000493208 TAP1Q03518 808 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 TOB2Q14106 344 aaPredicted RBP15.39■□□□□ 0.05
IRF1-210ENST00000493208 NTRK3Q16288 839 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 PKN1Q16512 942 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 PTPROQ16827 1216 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 TJAP1Q5JTD0 557 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 TSHZ1Q6ZSZ6 1077 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 MICALL1Q8N3F8 863 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 ATP8B4Q8TF62 1192 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 BBXQ8WY36 941 aaPredicted RBP15.39■□□□□ 0.05
IRF1-210ENST00000493208 RIT2Q99578 217 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 NRBP2Q9NSY0 501 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 VPS54Q9P1Q0 977 aa15.39■□□□□ 0.05
IRF1-210ENST00000493208 CCDC194A0A1B0GVG4 234 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 SMIM35A0A1B0GVV1 85 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 FAM86B1E9PN63 330 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 MAGEB2O15479 319 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 DKC1O60832 514 aaKnown RBP eCLIP15.38■□□□□ 0.05
IRF1-210ENST00000493208 GAS7O60861 476 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 FAM86B2P0C5J1 330 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 STK3Q13188 491 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 ITGB3BPQ13352 177 aaPredicted RBP15.38■□□□□ 0.05
IRF1-210ENST00000493208 PLCB4Q15147 1175 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
IRF1-210ENST00000493208 TRAF7Q6Q0C0 670 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 MOXD1Q6UVY6 613 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 BLIDQ8IZY5 108 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 RDM1Q8NG50 284 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 DNAJB3Q8WWF6 145 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 WNT8BQ93098 351 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 TEKT3Q9BXF9 490 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 FAM49AQ9H0Q0 323 aaPredicted RBP15.38■□□□□ 0.05
IRF1-210ENST00000493208 NCOA5Q9HCD5 579 aaKnown RBP15.38■□□□□ 0.05
IRF1-210ENST00000493208 TRPV2Q9Y5S1 764 aa15.38■□□□□ 0.05
IRF1-210ENST00000493208 IGKV6D-21A0A0A0MT36 114 aa15.37■□□□□ 0.05
IRF1-210ENST00000493208 MARCH6O60337 910 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms