RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 SMRP1Q8NCR6 262 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 GIMAP8Q8ND71 665 aaPredicted RBP15.82■□□□□ 0.12
GPNMB-213ENST00000492512 DNAJB3Q8WWF6 145 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 CLEC1BQ9P126 229 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 TUBE1Q9UJT0 475 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 CDY2AQ9Y6F7 541 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 KMT2EQ8IZD2 1858 aa15.82■□□□□ 0.12
GPNMB-213ENST00000492512 LOC730098B7Z3J9 87 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 CYTH3O43739 400 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 NRIP1P48552 1158 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 COASYQ13057 564 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 GRIK4Q16099 956 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 PCNX4Q63HM2 1172 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 CYB5R4Q7L1T6 521 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 NLRX1Q86UT6 975 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 KLHL23Q8NBE8 558 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 SPPL3Q8TCT6 385 aa15.81■□□□□ 0.12
GPNMB-213ENST00000492512 PLXNA4Q9HCM2 1894 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 MARK3P27448 753 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 CD52P31358 61 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 MRPS6P82932 125 aaKnown RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 TCF15Q12870 199 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 TRDNQ13061 729 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 CBX2Q14781 532 aaPredicted RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 PAN2Q504Q3 1202 aaKnown RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 XRRA1Q6P2D8 792 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 RBM23Q86U06 439 aaKnown RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 NPAS4Q8IUM7 802 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 SMARCC2Q8TAQ2 1214 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 POF1BQ8WVV4 589 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 LINC01599Q8WXQ3 324 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 PIBF1Q8WXW3 757 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 CUL5Q93034 780 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 FTHL17Q9BXU8 183 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 AGO3Q9H9G7 860 aaKnown RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 ERAP1Q9NZ08 941 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 BARX2Q9UMQ3 279 aaPredicted RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 USP15Q9Y4E8 981 aaPredicted RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 PTPRZ1P23471 2315 aaPredicted RBP15.8■□□□□ 0.12
GPNMB-213ENST00000492512 SPTBN4Q9H254 2564 aa15.8■□□□□ 0.12
GPNMB-213ENST00000492512 ERICH2A1L162 156 aa15.79■□□□□ 0.12
GPNMB-213ENST00000492512 MBLAC1A4D2B0 266 aaPredicted RBP15.79■□□□□ 0.12
GPNMB-213ENST00000492512 RPLP2P05387 115 aaKnown RBP15.79■□□□□ 0.12
GPNMB-213ENST00000492512 STAG3L1P0CL83 205 aa15.79■□□□□ 0.12
GPNMB-213ENST00000492512 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
GPNMB-213ENST00000492512 SEPT1Q8WYJ6 367 aa15.79■□□□□ 0.12
GPNMB-213ENST00000492512 GLG1Q92896 1179 aa15.79■□□□□ 0.12
GPNMB-213ENST00000492512 RPGRIP1Q96KN7 1286 aa15.79■□□□□ 0.12
GPNMB-213ENST00000492512 PHF7Q9BWX1 381 aaPredicted RBP15.79■□□□□ 0.12
GPNMB-213ENST00000492512 IFIT3O14879 490 aaKnown RBP15.78■□□□□ 0.12
GPNMB-213ENST00000492512 GLP2RO95838 553 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 IGBP1P78318 339 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 SIGLEC14Q08ET2 396 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 MARCH8Q5T0T0 291 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 IER5Q5VY09 327 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 USP17L6PQ6QN14 398 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 RTN4RL1Q86UN2 441 aaPredicted RBP15.78■□□□□ 0.12
GPNMB-213ENST00000492512 PLEKHM2Q8IWE5 1019 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 CRIPAKQ8N1N5 446 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 FAM49AQ9H0Q0 323 aaPredicted RBP15.78■□□□□ 0.12
GPNMB-213ENST00000492512 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 TLE6Q9H808 572 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 SQORQ9Y6N5 450 aa15.78■□□□□ 0.12
GPNMB-213ENST00000492512 GSTTP1A0A1W2PQM5 241 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 M0QZ92 97 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 GFRA3O60609 400 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 ATP9AO75110 1047 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 PPFIA3O75145 1194 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 SCG2P13521 617 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 MICAL1Q8TDZ2 1067 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 GPRASP2Q96D09 838 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 IRF2BPLQ9H1B7 796 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 FAM86C1Q9NVL1 165 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 LRFN2Q9ULH4 789 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 PADI3Q9ULW8 664 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.12
GPNMB-213ENST00000492512 RRN3P2A6NIE6 340 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 MEIS2O14770 477 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 KCNA2P16389 499 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 IBSPP21815 317 aaPredicted RBP15.76■□□□□ 0.11
GPNMB-213ENST00000492512 TMEM62Q0P6H9 643 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 TROAPQ12815 778 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 PAK2Q13177 524 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 WTAPQ15007 396 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 SART3Q15020 963 aaKnown RBP15.76■□□□□ 0.11
GPNMB-213ENST00000492512 CHD1LQ86WJ1 897 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 PCDHB12Q9Y5F1 795 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 TRPV2Q9Y5S1 764 aa15.76■□□□□ 0.11
GPNMB-213ENST00000492512 RIF1Q5UIP0 2472 aaKnown RBP15.76■□□□□ 0.11
GPNMB-213ENST00000492512 FNDC1Q4ZHG4 1894 aaPredicted RBP15.76■□□□□ 0.11
GPNMB-213ENST00000492512 FSD2A1L4K1 749 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 PIK3CDO00329 1044 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 PER2O15055 1255 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 INSRRP14616 1297 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 ATF7P17544 494 aaPredicted RBP15.75■□□□□ 0.11
GPNMB-213ENST00000492512 GATMP50440 423 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 VCPP55072 806 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms