RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ACTN1P12814 892 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 FDPSP14324 419 aaKnown RBP28.02■■■□□ 2.08
UPF3A-209ENST00000492270 ST3GAL1Q11201 340 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 GRIK4Q16099 956 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 KIF2CQ99661 725 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 AZI2Q9H6S1 392 aa28.02■■■□□ 2.08
UPF3A-209ENST00000492270 CTSHP09668 335 aa28.01■■■□□ 2.07
UPF3A-209ENST00000492270 ABHD15Q6UXT9 468 aa28.01■■■□□ 2.07
UPF3A-209ENST00000492270 RUFY4Q6ZNE9 571 aa28.01■■■□□ 2.07
UPF3A-209ENST00000492270 FAM177A1Q8N128 213 aaPredicted RBP28.01■■■□□ 2.07
UPF3A-209ENST00000492270 ZBTB10Q96DT7 871 aa28.01■■■□□ 2.07
UPF3A-209ENST00000492270 RSPH10B2B2RC85 870 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 RSPH10BP0C881 870 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 STAT5BP51692 787 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 USP11P51784 963 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 RABGGTBP53611 331 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 IGBP1P78318 339 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 PLCB4Q15147 1175 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 MARCH8Q5T0T0 291 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 GALNT17Q6IS24 598 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 CCDC60Q8IWA6 550 aaPredicted RBP28■■■□□ 2.07
UPF3A-209ENST00000492270 NSUN7Q8NE18 718 aaKnown RBP28■■■□□ 2.07
UPF3A-209ENST00000492270 TIFAQ96CG3 184 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 EVPLQ92817 2033 aa28■■■□□ 2.07
UPF3A-209ENST00000492270 IGKV6D-21A0A0A0MT36 114 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 MSH4O15457 936 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 JAK2O60674 1132 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 PARNO95453 639 aaKnown RBP27.99■■■□□ 2.07
UPF3A-209ENST00000492270 TDP2O95551 362 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 INSRRP14616 1297 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 ATP2A2P16615 1042 aaKnown RBP27.99■■■□□ 2.07
UPF3A-209ENST00000492270 PLPPR4Q7Z2D5 763 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 OSBPL7Q9BZF2 842 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 TBC1D22BQ9NU19 505 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 TUBE1Q9UJT0 475 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 TRPC6Q9Y210 931 aa27.99■■■□□ 2.07
UPF3A-209ENST00000492270 YBX2Q9Y2T7 364 aaKnown RBP27.99■■■□□ 2.07
UPF3A-209ENST00000492270 TMEM265A0A087WTH1 108 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 BACH1O14867 736 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 NONOQ15233 471 aaKnown RBP eCLIP27.98■■■□□ 2.07
UPF3A-209ENST00000492270 CNKSR3Q6P9H4 555 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 OXER1Q8TDS5 423 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 TRAPPC12Q8WVT3 735 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 GJA10Q969M2 543 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 C22orf23Q9BZE7 217 aa27.98■■■□□ 2.07
UPF3A-209ENST00000492270 MYOGP15173 224 aa27.97■■■□□ 2.07
UPF3A-209ENST00000492270 INF2Q27J81 1249 aa27.97■■■□□ 2.07
UPF3A-209ENST00000492270 KRT25Q7Z3Z0 450 aa27.97■■■□□ 2.07
UPF3A-209ENST00000492270 CDX2Q99626 313 aaPredicted RBP27.97■■■□□ 2.07
UPF3A-209ENST00000492270 NKX2-4Q9H2Z4 354 aa27.97■■■□□ 2.07
UPF3A-209ENST00000492270 MYO9BQ13459 2157 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 MBLAC1A4D2B0 266 aaPredicted RBP27.96■■■□□ 2.07
UPF3A-209ENST00000492270 BAIAP3O94812 1187 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 XBP1P17861 261 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 RAB30Q15771 203 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 ZNF746Q6NUN9 644 aaPredicted RBP27.96■■■□□ 2.07
UPF3A-209ENST00000492270 SWSAP1Q6NVH7 229 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 ZNF576Q9H609 170 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 ZNF302Q9NR11 478 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 MSRAQ9UJ68 235 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 STXBP5LQ9Y2K9 1186 aa27.96■■■□□ 2.07
UPF3A-209ENST00000492270 CAND2O75155 1236 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 FOSBP53539 338 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 WDR5P61964 334 aaKnown RBP27.95■■■□□ 2.06
UPF3A-209ENST00000492270 KRT76Q01546 638 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 FAM160B1Q5W0V3 765 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 MIS18BP1Q6P0N0 1132 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 WASF1Q92558 559 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 SLC9A7Q96T83 725 aa27.95■■■□□ 2.06
UPF3A-209ENST00000492270 POTEB3A0JP26 581 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 ATP4AP20648 1035 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 DEFB103AP81534 67 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 GRIN2CQ14957 1233 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 Q4G0T1 1027 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 POTEBQ6S5H4 581 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 TMCO2Q7Z6W1 182 aaPredicted RBP27.94■■■□□ 2.06
UPF3A-209ENST00000492270 DBF4BQ8NFT6 615 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 MYLIPQ8WY64 445 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 SLC5A5Q92911 643 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 LIMCH1Q9UPQ0 1083 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 CHD7Q9P2D1 2997 aa27.94■■■□□ 2.06
UPF3A-209ENST00000492270 CYP3A7-CYP3A51PA0A087WV96 503 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 CCDC194A0A1B0GVG4 234 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 FAM205CA6NFA0 338 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 RRN3P2A6NIE6 340 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 CYP3A7P24462 503 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 KCNJ6P48051 423 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 RBM25P49756 843 aaKnown RBP27.93■■■□□ 2.06
UPF3A-209ENST00000492270 EARS2Q5JPH6 523 aaKnown RBP27.93■■■□□ 2.06
UPF3A-209ENST00000492270 TAF2Q6P1X5 1199 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 PDXDC2PQ6P474 469 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 SMAP1Q8IYB5 467 aaPredicted RBP27.93■■■□□ 2.06
UPF3A-209ENST00000492270 DNAJB3Q8WWF6 145 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 MBOAT7Q96N66 472 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 TCEAL9Q9UHQ7 104 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 PCDHA11Q9Y5I1 949 aa27.93■■■□□ 2.06
UPF3A-209ENST00000492270 CHMP2AO43633 222 aa27.92■■■□□ 2.06
UPF3A-209ENST00000492270 CHRNA1P02708 482 aa27.92■■■□□ 2.06
UPF3A-209ENST00000492270 SLC26A2P50443 739 aa27.92■■■□□ 2.06
UPF3A-209ENST00000492270 NR5A1Q13285 461 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms