RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 DHX15O43143 795 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 PRPF3O43395 683 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 AMHP03971 560 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 RPLP2P05387 115 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 LINC00271P0C7V0 271 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 ARP10275 920 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 ADD1P35611 737 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 ARHGAP4P98171 946 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 ITGB3BPQ13352 177 aaPredicted RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 NTRK3Q16288 839 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 UTP14CQ5TAP6 766 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 KRT40Q6A162 431 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 RUFY4Q6ZNE9 571 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 PPM1EQ8WY54 764 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 ZBED2Q9BTP6 218 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 ANO3Q9BYT9 981 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 AGO4Q9HCK5 861 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 JPH1Q9HDC5 661 aaPredicted RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 SLC9A2Q9UBY0 812 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 COG5Q9UP83 839 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 SNX14Q9Y5W7 946 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 EVPLQ92817 2033 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 NLRC5Q86WI3 1866 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 GOLGA8AA7E2F4 631 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 GOLGA8BA8MQT2 603 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 FAM86B1E9PN63 330 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 ADAMTS3O15072 1205 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 GTPBP6O43824 516 aaPredicted RBP9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 EDIL3O43854 480 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 CCNE2O96020 404 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 FAM86B2P0C5J1 330 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 SCG2P13521 617 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 INSRRP14616 1297 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 CIITAP33076 1130 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 SLC26A2P50443 739 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 ADCY7P51828 1080 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 NAPAP54920 295 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 ACTR2P61160 394 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 PPFIA1Q13136 1202 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 LPIN1Q14693 890 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 COL19A1Q14993 1142 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 GRIK4Q16099 956 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 FBXO47Q5MNV8 452 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 MCTP2Q6DN12 878 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 RC3H2Q9HBD1 1191 aaKnown RBP9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 TUBE1Q9UJT0 475 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 PCDHA2Q9Y5H9 948 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 XIRP2A4UGR9 3374 aa9.57□□□□□ -0.88
SMARCB1-207ENST00000491967 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 C5orf67F2Z3F1 127 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 ENPP3O14638 875 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 CPA1P15085 419 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 RPS6KB1P23443 525 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 STAT5BP51692 787 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 SP4Q02446 784 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 TFF2Q03403 129 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 PLCB4Q15147 1175 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 AAK1Q2M2I8 961 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 ABHD15Q6UXT9 468 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 Q6ZUG5 572 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 GLG1Q92896 1179 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 TNPO1Q92973 898 aaKnown RBP9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 ZNF689Q96CS4 500 aaPredicted RBP9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 JAKMIP1Q96N16 626 aaKnown RBP9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 SAMD11Q96NU1 681 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 IFIH1Q9BYX4 1025 aaKnown RBP9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 TMEM260Q9NX78 707 aa9.56□□□□□ -0.88
SMARCB1-207ENST00000491967 ATG2AQ2TAZ0 1938 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 SMIM35A0A1B0GVV1 85 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 ZBTB42B2RXF5 422 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 H3BNC9 293 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 CTSHP09668 335 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 IFNAR1P17181 557 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 MARK3P27448 753 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 PDIA3P30101 505 aaKnown RBP9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 METAP2P50579 478 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 MRPS6P82932 125 aaKnown RBP9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 EPC2Q52LR7 807 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 TSHZ1Q6ZSZ6 1077 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 RSPH3Q86UC2 560 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 RTN4RL1Q86UN2 441 aaPredicted RBP9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 MYOCDQ8IZQ8 938 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 NME8Q8N427 588 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 GDPD5Q8WTR4 605 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 DNAJB3Q8WWF6 145 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 CLP1Q92989 425 aaKnown RBP9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 BRF1Q92994 677 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 HLA-CQ95604 372 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 LENG9Q96B70 501 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 PGBD1Q96JS3 809 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 SDF4Q9BRK5 362 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 C17orf80Q9BSJ5 609 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 AGO3Q9H9G7 860 aaKnown RBP9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 ZSWIM6Q9HCJ5 1215 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms