RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 BBXQ8WY36 941 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 PRMT6Q96LA8 375 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 ERGIC2Q96RQ1 377 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 RIT2Q99578 217 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 GCNT4Q9P109 453 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 CTTNBP2NLQ9P2B4 639 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 PLIN4Q96Q06 1357 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 CCDC151A5D8V7 595 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 CTIFO43310 598 aaKnown RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 RFX1P22670 979 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 LIG4P49917 911 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 XRRA1Q6P2D8 792 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 RNF10Q8N5U6 811 aaKnown RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 TRERF1Q96PN7 1200 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 JPH2Q9BR39 696 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 PRDM10Q9NQV6 1147 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 MKRN1Q9UHC7 482 aaKnown RBP8.03□□□□□ -1.12
NPHP3-208ENST00000490993 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
NPHP3-208ENST00000490993 CTNND1O60716 968 aaKnown RBP8.02□□□□□ -1.12
NPHP3-208ENST00000490993 SKIDA1Q1XH10 827 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 PADI6Q6TGC4 694 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 RDH13Q8NBN7 331 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 SPATA20Q8TB22 786 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.12
NPHP3-208ENST00000490993 MYOZ2Q9NPC6 264 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 KMT5AQ9NQR1 393 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 CLEC11AQ9Y240 323 aa8.02□□□□□ -1.12
NPHP3-208ENST00000490993 ANKRD36CQ5JPF3 1778 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 MYH3P11055 1940 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 KLRG2A4D1S0 409 aaPredicted RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 C19orf81C9J6K1 198 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 SMIM22K7EJ46 135 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 CLIC2O15247 247 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 EIF3DO15371 548 aaKnown RBP eCLIP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 GYPCP04921 128 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 IVLP07476 585 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 QARSP47897 775 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 LMAN1P49257 510 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 POLGP54098 1239 aaPredicted RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 YWHAEP62258 255 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 RASA3Q14644 834 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 ARHGAP44Q17R89 818 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 PPP1R2P3Q6NXS1 205 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 MAIP1Q8WWC4 291 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 RMDN3Q96TC7 470 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 STMN4Q9H169 189 aaPredicted RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 MLXIPQ9HAP2 919 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 RAVER2Q9HCJ3 691 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 MRFAP1Q9Y605 127 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 A0A087X0B3 334 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 CEP104O60308 925 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 EIF2AK2P19525 551 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 CAP2P40123 477 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 BPIFB4P59827 614 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 KCNH2Q12809 1159 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 FIGNQ5HY92 759 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 CFAP58Q5T655 872 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 CERS5Q8N5B7 392 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 PIGOQ8TEQ8 1089 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 ZNF384Q8TF68 577 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 AKT1S1Q96B36 256 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 LRRC45Q96CN5 670 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 MTRF1LQ9UGC7 380 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 UTP11Q9Y3A2 253 aaKnown RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 LRRC53A6NM62 1247 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 TMEM110-MUSTN1A8MSY1 372 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 SPOPO43791 374 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 OSBPP22059 807 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 TBX2Q13207 712 aaPredicted RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 PRKG1Q13976 671 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 SPDYE2Q495Y8 402 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 TTI2Q6NXR4 508 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 PDXDC1Q6P996 788 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 ZBTB8OSQ8IWT0 167 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 SYT2Q8N9I0 419 aaPredicted RBP8.02□□□□□ -1.13
NPHP3-208ENST00000490993 IFT81Q8WYA0 676 aa8.02□□□□□ -1.13
NPHP3-208ENST00000490993 ERICH4A6NGS2 130 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 FXR1P51114 621 aaKnown RBP eCLIP8.01□□□□□ -1.13
NPHP3-208ENST00000490993 PSMC5P62195 406 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 GABPAQ06546 454 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 TRPC3Q13507 836 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 GADL1Q6ZQY3 521 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CEP128Q6ZU80 1094 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 MICALCLQ6ZW33 695 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 FAM133AQ8N9E0 248 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 MCPH1Q8NEM0 835 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SYN2Q92777 582 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-208ENST00000490993 PBKQ96KB5 322 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CEP170P1Q96L14 293 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 MTMR9Q96QG7 549 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 LXNQ9BS40 222 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 C1orf112Q9NSG2 853 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 IVNS1ABPQ9Y6Y0 642 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 COL1A1P02452 1464 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-208ENST00000490993 TOGARAM1Q9Y4F4 1720 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SSU72P8A0A1W2PR75 194 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 BUB1O43683 1085 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SNRPFP62306 86 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms