RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TUBE1Q9UJT0 475 aa35.68■■■■□ 3.3
LDB1-204ENST00000490751 TLL1O43897 1013 aa35.67■■■■□ 3.3
LDB1-204ENST00000490751 PLEKHG4Q58EX7 1191 aa35.67■■■■□ 3.3
LDB1-204ENST00000490751 TAF2Q6P1X5 1199 aa35.67■■■■□ 3.3
LDB1-204ENST00000490751 CPLX2Q6PUV4 134 aaKnown RBP35.67■■■■□ 3.3
LDB1-204ENST00000490751 CCNE2O96020 404 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 NLRP5P59047 1200 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 ANAPC15P60006 121 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 IGBP1P78318 339 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 SETQ01105 290 aaPredicted RBP35.66■■■■□ 3.3
LDB1-204ENST00000490751 ADGRE1Q14246 886 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 UIMC1Q96RL1 719 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 OSBPL7Q9BZF2 842 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 TRPC6Q9Y210 931 aa35.66■■■■□ 3.3
LDB1-204ENST00000490751 SIP14410 1827 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 MBLAC1A4D2B0 266 aaPredicted RBP35.65■■■■□ 3.3
LDB1-204ENST00000490751 IPO5O00410 1097 aaKnown RBP35.65■■■■□ 3.3
LDB1-204ENST00000490751 ATG7O95352 703 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 DEXIO95424 95 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 INSRRP14616 1297 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 STAT5BP51692 787 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 FAM26DQ5JW98 314 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 MARCH8Q5T0T0 291 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 PLPPR4Q7Z2D5 763 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 ZNF577Q9BSK1 485 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 ZBED2Q9BTP6 218 aa35.65■■■■□ 3.3
LDB1-204ENST00000490751 CHD7Q9P2D1 2997 aa35.64■■■■□ 3.3
LDB1-204ENST00000490751 DHX15O43143 795 aaKnown RBP35.64■■■■□ 3.3
LDB1-204ENST00000490751 ARHGEF15O94989 841 aa35.64■■■■□ 3.3
LDB1-204ENST00000490751 PLCB4Q15147 1175 aa35.64■■■■□ 3.3
LDB1-204ENST00000490751 RPAINQ86UA6 219 aa35.64■■■■□ 3.3
LDB1-204ENST00000490751 SEPT8Q92599 483 aa35.64■■■■□ 3.3
LDB1-204ENST00000490751 RRN3P2A6NIE6 340 aa35.63■■■■□ 3.29
LDB1-204ENST00000490751 IGFBP4P22692 258 aa35.63■■■■□ 3.29
LDB1-204ENST00000490751 LIN28BQ6ZN17 250 aaKnown RBP eCLIP35.63■■■■□ 3.29
LDB1-204ENST00000490751 UNC80Q8N2C7 3258 aa35.63■■■■□ 3.29
LDB1-204ENST00000490751 GJB5O95377 273 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 CIITAP33076 1130 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 TAP1Q03518 808 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 MKRN4PQ13434 485 aaPredicted RBP35.62■■■■□ 3.29
LDB1-204ENST00000490751 PRR16Q569H4 304 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 ABHD15Q6UXT9 468 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 RSPH3Q86UC2 560 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 USP38Q8NB14 1042 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 TNPO1Q92973 898 aaKnown RBP35.62■■■■□ 3.29
LDB1-204ENST00000490751 ZBTB10Q96DT7 871 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 CERS4Q9HA82 394 aa35.62■■■■□ 3.29
LDB1-204ENST00000490751 IGKV6D-21A0A0A0MT36 114 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 BACH1O14867 736 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 CHRNA1P02708 482 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 SCRN1Q12765 414 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 DNAJB3Q8WWF6 145 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 AIFM3Q96NN9 605 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 TBC1D22BQ9NU19 505 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 PCDHA4Q9UN74 947 aa35.61■■■■□ 3.29
LDB1-204ENST00000490751 LCHNA4D1U4 455 aa35.6■■■■□ 3.29
LDB1-204ENST00000490751 SLC26A2P50443 739 aa35.6■■■■□ 3.29
LDB1-204ENST00000490751 FAM160B1Q5W0V3 765 aa35.6■■■■□ 3.29
LDB1-204ENST00000490751 FAM117BQ6P1L5 589 aa35.6■■■■□ 3.29
LDB1-204ENST00000490751 CCDC60Q8IWA6 550 aaPredicted RBP35.6■■■■□ 3.29
LDB1-204ENST00000490751 SLKQ9H2G2 1235 aaPredicted RBP35.6■■■■□ 3.29
LDB1-204ENST00000490751 TPCN1Q9ULQ1 816 aa35.6■■■■□ 3.29
LDB1-204ENST00000490751 AMHP03971 560 aa35.59■■■■□ 3.29
LDB1-204ENST00000490751 MGAT3Q09327 533 aa35.59■■■■□ 3.29
LDB1-204ENST00000490751 MIS18BP1Q6P0N0 1132 aa35.59■■■■□ 3.29
LDB1-204ENST00000490751 TRAPPC12Q8WVT3 735 aa35.59■■■■□ 3.29
LDB1-204ENST00000490751 PPM1EQ8WY54 764 aa35.59■■■■□ 3.29
LDB1-204ENST00000490751 LENG9Q96B70 501 aa35.59■■■■□ 3.29
LDB1-204ENST00000490751 POTEB3A0JP26 581 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 EDIL3O43854 480 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 POTEBQ6S5H4 581 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 MYOCDQ8IZQ8 938 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 RAD9AQ99638 391 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 IFIH1Q9BYX4 1025 aaKnown RBP35.58■■■■□ 3.29
LDB1-204ENST00000490751 FAM49AQ9H0Q0 323 aaPredicted RBP35.58■■■■□ 3.29
LDB1-204ENST00000490751 ZNF302Q9NR11 478 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 PRUNE2Q8WUY3 3088 aa35.58■■■■□ 3.29
LDB1-204ENST00000490751 CDKL5O76039 1030 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 GHRP10912 638 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 AK2P54819 239 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 ZNF746Q6NUN9 644 aaPredicted RBP35.57■■■■□ 3.28
LDB1-204ENST00000490751 BLIDQ8IZY5 108 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 ARNTL2Q8WYA1 636 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 APBB2Q92870 758 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 TCEAL9Q9UHQ7 104 aa35.57■■■■□ 3.28
LDB1-204ENST00000490751 RFXAPO00287 272 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 PFKFB2O60825 505 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 EIF5BO60841 1220 aaKnown RBP35.56■■■■□ 3.28
LDB1-204ENST00000490751 USP11P51784 963 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 ANKRD1Q15327 319 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 SWSAP1Q6NVH7 229 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 PDXDC2PQ6P474 469 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 SPRED2Q7Z698 418 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 FAM177A1Q8N128 213 aaPredicted RBP35.56■■■■□ 3.28
LDB1-204ENST00000490751 DAGLBQ8NCG7 672 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 TBCKQ8TEA7 893 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 C22orf23Q9BZE7 217 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 CDY2AQ9Y6F7 541 aa35.56■■■■□ 3.28
LDB1-204ENST00000490751 MYH9P35579 1960 aaKnown RBP35.55■■■■□ 3.28
LDB1-204ENST00000490751 EPOPA6NHQ4 379 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms