RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 DLG5Q8TDM6 1919 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 PXDNQ92626 1479 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 WDR91A4D1P6 747 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 CFBP00751 764 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 EIF3BP55884 814 aaKnown RBP13.93□□□□□ -0.18
SHOX2-205ENST00000490689 POLE2P56282 527 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 AMPD2Q01433 879 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 COASYQ13057 564 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 PKN1Q16512 942 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 KDM7AQ6ZMT4 941 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 FBXL16Q8N461 479 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 AENQ8WTP8 325 aaKnown RBP13.93□□□□□ -0.18
SHOX2-205ENST00000490689 MED15Q96RN5 788 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 BRIP1Q9BX63 1249 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 CCSER1Q9C0I3 900 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 INTUQ9ULD6 942 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 PASKQ96RG2 1323 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 NPHP3-ACAD11A0A0J9YXS1 232 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 ERFP50548 548 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 PMS2P54278 862 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 BIRC2Q13490 618 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 SLC18A3Q16572 532 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 WDR59Q6PJI9 974 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 GPR101Q96P66 508 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 FERP16591 822 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 HSPA2P54652 639 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 PPP2R5EQ16537 467 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 ANKRD20A3Q5VUR7 823 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 FAM186BQ8IYM0 893 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 SAAL1Q96ER3 474 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 DDX23Q9BUQ8 820 aaKnown RBP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 DBR1Q9UK59 544 aaKnown RBP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 POTEB3A0JP26 581 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 ARHGEF35A5YM69 484 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 POTECB2RU33 542 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 CSF1RP07333 972 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 RCAN1P53805 252 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 ZNF746Q6NUN9 644 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 POTEBQ6S5H4 581 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 NSMFQ6X4W1 530 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 RAB3IPQ96QF0 476 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-205ENST00000490689 VCXQ9H320 206 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 PCDHA1Q9Y5I3 950 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
SHOX2-205ENST00000490689 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 FAM237AA0A1B0GTK4 181 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 EVI5O60447 810 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 BAG2O95816 211 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 BTDP43251 543 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 PDE6CP51160 858 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 TMED2Q15363 201 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 ADAMTS13Q76LX8 1427 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 SUGP1Q8IWZ8 645 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 FAM178BQ8IXR5 827 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 SCYL3Q8IZE3 742 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 RAPGEF5Q92565 580 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 TXNDC9O14530 226 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 C6orf118Q5T5N4 469 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 PPP4R3AQ6IN85 833 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 ERGIC2Q96RQ1 377 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 ECT2Q9H8V3 914 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 ETNK1Q9HBU6 452 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 METTL14Q9HCE5 456 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 KIF1CO43896 1103 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 RPS6KA5O75582 802 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 SLC9A1P19634 815 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 LMNB1P20700 586 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 SMTNP53814 917 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 RBBP5Q15291 538 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 MFSD14BQ5SR56 506 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 KAZNQ674X7 775 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 CAPRIN2Q6IMN6 1127 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 NSMCE1Q8WV22 266 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 ANKS1AQ92625 1134 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 GLG1Q92896 1179 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 XPO6Q96QU8 1125 aaKnown RBP13.91□□□□□ -0.18
SHOX2-205ENST00000490689 TLR10Q9BXR5 811 aa13.91□□□□□ -0.18
SHOX2-205ENST00000490689 UBXN2AP68543 259 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 TRADDQ15628 312 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 HP1BP3Q5SSJ5 553 aaPredicted RBP13.9□□□□□ -0.18
SHOX2-205ENST00000490689 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 NKX2-3Q8TAU0 364 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
SHOX2-205ENST00000490689 PNPLA7Q6ZV29 1317 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 GRID2IPA4D2P6 1211 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 GNPATO15228 680 aa13.9□□□□□ -0.18
SHOX2-205ENST00000490689 CDC25CP30307 473 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms