RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PNMA2Q9UL42 364 aa8.47□□□□□ -1.05
PRPF4B-208ENST00000490653 BRPF3Q9ULD4 1205 aa8.47□□□□□ -1.05
PRPF4B-208ENST00000490653 TRIP12Q14669 1992 aaPredicted RBP8.47□□□□□ -1.05
PRPF4B-208ENST00000490653 SCN5AQ14524 2016 aa8.47□□□□□ -1.05
PRPF4B-208ENST00000490653 KIAA1217Q5T5P2 1943 aa8.46□□□□□ -1.05
PRPF4B-208ENST00000490653 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 GCOM1H8Y6P7 765 aaPredicted RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 NKRFO15226 690 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 EIF3JO75822 258 aaKnown RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 GH1P01241 217 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 MMP3P08254 477 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 POLR2MP0CAP2 368 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 MYOGP15173 224 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 MCM5P33992 734 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 MRPS9P82933 396 aaKnown RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 EXOSC10Q01780 885 aaKnown RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 SEMA3FQ13275 785 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 PPIGQ13427 754 aaKnown RBP eCLIP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 GPNMBQ14956 572 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 BMP2KLQ5H9B9 411 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 CASC1Q6TDU7 716 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 LYPD8Q6UX82 237 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 NFXL1Q6ZNB6 911 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 OTOP2Q7RTS6 562 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 TMEM199Q8N511 208 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 FAM174AQ8TBP5 190 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 PPM1EQ8WY54 764 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 CDK15Q96Q40 435 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 ALG1Q9BT22 464 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 IL23AQ9NPF7 189 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 HDAC6Q9UBN7 1215 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 MROH7Q68CQ1 1323 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 SCN10AQ9Y5Y9 1956 aa8.46□□□□□ -1.06
PRPF4B-208ENST00000490653 TET1Q8NFU7 2136 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 EPOPA6NHQ4 379 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 MEIS2O14770 477 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 ADAMTS3O15072 1205 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 FGBP02675 491 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 CPT1AP50416 773 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 RABGGTBP53611 331 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 TFF2Q03403 129 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 TCTN1Q2MV58 587 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 HSDL1Q3SXM5 330 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 SPRED2Q7Z698 418 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 DEFB128Q7Z7B8 93 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 ADAMTS19Q8TE59 1207 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 DHX38Q92620 1227 aaKnown RBP8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 WNT8BQ93098 351 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 TMEM87BQ96K49 555 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 NEK1Q96PY6 1258 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 DOCK5Q9H7D0 1870 aa8.45□□□□□ -1.06
PRPF4B-208ENST00000490653 MYO9BQ13459 2157 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 B4DLN1 442 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 DDAH1O94760 285 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 GGPS1O95749 300 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 IQCF3P0C7M6 154 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 ZNF286BP0CG31 522 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 CDC27P30260 824 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 LIFRP42702 1097 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 SART3Q15020 963 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 UBE2SQ16763 222 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 CELF3Q5SZQ8 465 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 FANCBQ8NB91 859 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 CTCFLQ8NI51 663 aaPredicted RBP8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 HERVK_113Q902F9 699 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 CCDC136Q96JN2 1154 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 MPHOSPH6Q99547 160 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 MAP3K14Q99558 947 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 SPZ1Q9BXG8 430 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 OSBPL7Q9BZF2 842 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 MAF1Q9H063 256 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 NKX2-4Q9H2Z4 354 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
PRPF4B-208ENST00000490653 HAS3O00219 553 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 RFXAPO00287 272 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 KPNA6O60684 536 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 ATP9AO75110 1047 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 PPFIA3O75145 1194 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 CDC45O75419 566 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 CASTP20810 708 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 UBA1P22314 1058 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 SMARCA1P28370 1054 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 CCND2P30279 289 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 CTHP32929 405 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 KCNQ1P51787 676 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 PTGISQ16647 500 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 TSGA10IPQ3SY00 556 aa8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 BRDTQ58F21 947 aaPredicted RBP8.43□□□□□ -1.06
PRPF4B-208ENST00000490653 KRT40Q6A162 431 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms