RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 NCAM1P13591 858 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 PMS1P54277 932 aaKnown RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 RRP1P56182 461 aaKnown RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 ALDH1L2Q3SY69 923 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 NOL9Q5SY16 702 aaKnown RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 AXDND1Q5T1B0 1012 aaPredicted RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 INTS3Q68E01 1043 aaKnown RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 PTCHD1Q96NR3 888 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 RXFP1Q9HBX9 757 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 GP6Q9HCN6 339 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 TSPYL4Q9UJ04 414 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 SOS1Q07889 1333 aaPredicted RBP5.74□□□□□ -1.49
RBM39-235ENST00000490354 SPATA31A1Q5TZJ5 1347 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 SPATA31A5Q5VU36 1347 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 SPATA31A7Q8IWB4 1347 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 OVOS2A0A0G2JMS6 1433 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 MARF1Q9Y4F3 1742 aaKnown RBP5.74□□□□□ -1.49
RBM39-235ENST00000490354 ERVV-2B6SEH9 535 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 EXOC5O00471 708 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 BCAR3O75815 825 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 IFNGR1P15260 489 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 NOP2P46087 812 aaKnown RBP5.74□□□□□ -1.49
RBM39-235ENST00000490354 CORO7P57737 925 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 TEFQ10587 303 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 VPS72Q15906 364 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 ZNF827Q17R98 1081 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 FIBCD1Q8N539 461 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 C8orf58Q8NAV2 365 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 DDX1Q92499 740 aaKnown RBP5.74□□□□□ -1.49
RBM39-235ENST00000490354 ALG3Q92685 438 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 SMARCC1Q92922 1105 aaPredicted RBP5.74□□□□□ -1.49
RBM39-235ENST00000490354 C8orf37Q96NL8 207 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 CHMP4AQ9BY43 222 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 BCAS3Q9H6U6 928 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 MIS18AQ9NYP9 233 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 USP35Q9P2H5 1018 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 PALD1Q9ULE6 856 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 ZNRF3Q9ULT6 936 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 RGPD1P0DJD0 1748 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 COL16A1Q07092 1604 aaPredicted RBP5.74□□□□□ -1.49
RBM39-235ENST00000490354 MEGF6O75095 1541 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 SLIT2O94813 1529 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 PCDH11XQ9BZA7 1347 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 PCDH11YQ9BZA8 1340 aa5.74□□□□□ -1.49
RBM39-235ENST00000490354 TBC1D8O95759 1140 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 TP53P04637 393 aaPredicted RBP5.73□□□□□ -1.49
RBM39-235ENST00000490354 CD3EP07766 207 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 HOXB7P09629 217 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 CD247P20963 164 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 L1CAMP32004 1257 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 CNR2P34972 360 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 MAGEA10P43363 369 aaPredicted RBP5.73□□□□□ -1.49
RBM39-235ENST00000490354 EIF4A1P60842 406 aaKnown RBP5.73□□□□□ -1.49
RBM39-235ENST00000490354 TWISTNBQ3B726 338 aaPredicted RBP5.73□□□□□ -1.49
RBM39-235ENST00000490354 USP48Q86UV5 1035 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 CARFQ8N187 725 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 TSPYL6Q8N831 410 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 NLGN2Q8NFZ4 835 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 SSH1Q8WYL5 1049 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 SLC52A2Q9HAB3 445 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 FAM86C1Q9NVL1 165 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 FHOD1Q9Y613 1164 aa5.73□□□□□ -1.49
RBM39-235ENST00000490354 BCL9LQ86UU0 1499 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 ELL2O00472 640 aaPredicted RBP5.72□□□□□ -1.49
RBM39-235ENST00000490354 IPO8O15397 1037 aaKnown RBP5.72□□□□□ -1.49
RBM39-235ENST00000490354 PLIN1O60240 522 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 NOBOXO60393 691 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 GLI4P10075 376 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 PMLP29590 882 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 ADAM17P78536 824 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 MEX3CQ5U5Q3 659 aaKnown RBP5.72□□□□□ -1.49
RBM39-235ENST00000490354 B3GNT8Q7Z7M8 397 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 KIAA0825Q8IV33 1275 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 ARHGAP45Q92619 1136 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 NOL6Q9H6R4 1146 aaKnown RBP5.72□□□□□ -1.49
RBM39-235ENST00000490354 SMC4Q9NTJ3 1288 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 ZNF451Q9Y4E5 1061 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 COL22A1Q8NFW1 1626 aaPredicted RBP5.72□□□□□ -1.49
RBM39-235ENST00000490354 DISP2A7MBM2 1401 aa5.72□□□□□ -1.49
RBM39-235ENST00000490354 COL18A1P39060 1754 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 ERCC3P19447 782 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 POU4F1Q01851 419 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 MRPL58Q14197 206 aaKnown RBP5.71□□□□□ -1.5
RBM39-235ENST00000490354 ZYXQ15942 572 aaKnown RBP5.71□□□□□ -1.5
RBM39-235ENST00000490354 DDB1Q16531 1140 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 KRT24Q2M2I5 525 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 ZKSCAN2Q63HK3 967 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 ZNF790Q6PG37 636 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 TAB3Q8N5C8 712 aaPredicted RBP5.71□□□□□ -1.5
RBM39-235ENST00000490354 RGS22Q8NE09 1264 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 ZDHHC15Q96MV8 337 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 NOX5Q96PH1 765 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 SPON2Q9BUD6 331 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 LNPKQ9C0E8 428 aa5.71□□□□□ -1.5
RBM39-235ENST00000490354 SF3B6Q9Y3B4 125 aaKnown RBP5.71□□□□□ -1.5
RBM39-235ENST00000490354 CCDC9Q9Y3X0 531 aaKnown RBP5.71□□□□□ -1.5
RBM39-235ENST00000490354 LMO7Q8WWI1 1683 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms