RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 MBLAC1A4D2B0 266 aaPredicted RBP13.49□□□□□ -0.25
FDPS-215ENST00000490140 CHRNA1P02708 482 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 KCNA2P16389 499 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 MARK3P27448 753 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 LIFRP42702 1097 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
FDPS-215ENST00000490140 ZP2Q05996 745 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 LPIN1Q14693 890 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 FBXO47Q5MNV8 452 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 P2RX5Q93086 422 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
FDPS-215ENST00000490140 TTC3P53804 2025 aa13.49□□□□□ -0.25
FDPS-215ENST00000490140 MYO7AQ13402 2215 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 MMP1P03956 469 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 SLC26A2P50443 739 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 ANTXR2P58335 489 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 MGAT3Q09327 533 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 PAK2Q13177 524 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 SMAD4Q13485 552 aaKnown RBP13.48□□□□□ -0.25
FDPS-215ENST00000490140 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 RUFY4Q6ZNE9 571 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 NPAS4Q8IUM7 802 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 CMTR2Q8IYT2 770 aaKnown RBP13.48□□□□□ -0.25
FDPS-215ENST00000490140 DNAJB3Q8WWF6 145 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
FDPS-215ENST00000490140 MYL10Q9BUA6 226 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 RC3H2Q9HBD1 1191 aaKnown RBP13.48□□□□□ -0.25
FDPS-215ENST00000490140 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
FDPS-215ENST00000490140 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 ENPP3O14638 875 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 FOSP01100 380 aaPredicted RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 ITGB5P18084 799 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 PDE4AP27815 886 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 IGBP1P78318 339 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 YTHDC1Q96MU7 727 aaKnown RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 FAM49AQ9H0Q0 323 aaPredicted RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 JADE2Q9NQC1 790 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
FDPS-215ENST00000490140 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 UBIAD1Q9Y5Z9 338 aa13.47□□□□□ -0.25
FDPS-215ENST00000490140 NFASCO94856 1347 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 GSTTP1A0A1W2PQM5 241 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 GRM6O15303 877 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 DGKIO75912 1065 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 SCG2P13521 617 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 NDUFV1P49821 464 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 CTC1Q2NKJ3 1217 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 RNF20Q5VTR2 975 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 PLPPR4Q7Z2D5 763 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 NME8Q8N427 588 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 SRBD1Q8N5C6 995 aaKnown RBP13.46□□□□□ -0.25
FDPS-215ENST00000490140 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
FDPS-215ENST00000490140 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 TCEAL9Q9UHQ7 104 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 CD207Q9UJ71 328 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 LRFN2Q9ULH4 789 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 PCDHA6Q9UN73 950 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 PCDHA8Q9Y5H6 950 aa13.46□□□□□ -0.25
FDPS-215ENST00000490140 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 ATP9AO75110 1047 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 SRGAP2BP0DMP2 458 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 INSRRP14616 1297 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 CD52P31358 61 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 NAPAP54920 295 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 HYAL1Q12794 435 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 UBE2SQ16763 222 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 FAM160B1Q5W0V3 765 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 MICU3Q86XE3 530 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 MFSD14AQ96MC6 490 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 AAASQ9NRG9 546 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
FDPS-215ENST00000490140 KDM3AQ9Y4C1 1321 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 POTEB3A0JP26 581 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 STAT5BP51692 787 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 ACTR2P61160 394 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 PKN1Q16512 942 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 CEP55Q53EZ4 464 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 MARCH8Q5T0T0 291 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
FDPS-215ENST00000490140 SGMS1Q86VZ5 419 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms